Return to main results Retrieve Phyre Job Id

Job DescriptionP41407
Confidence50.07%DateThu Jan 5 12:01:28 GMT 2012
Rank121Aligned Residues98
% Identity15%Templatec2ofpB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ketopantoate reductase; PDBTitle: crystal structure of escherichia coli ketopantoate2 reductase in a ternary complex with nadp+ and pantoate
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  KVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIA
Query Conservation 




 



   
 
  
                
   

    
                                  
Alig confidence 




.....


....












..


































...........

Template Conservation 

 

.....
 
.... 

   
  
   ..
  
    
                          ...........  
Template Sequence  KITVL. . . . . GCG. . . . ALGQLWLTALCKQ. . GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND. . . . . . . . . . . PD
Template Known Secondary structure  .....

S....T..T

SS

S

TTS

BS
...........
Template Predicted Secondary structure  .....


....
..


















...........
Template SS confidence 















































































   2.... ... 10.........20.. .......30.........40.........50....... ..
 
   83......90.........100.........110.........120.........130.........140..
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  ELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRG
Query Conservation   
  

 

  



   


 

  



                 
  
    
 
 
Alig confidence 














......









..............














Template Conservation       




 
   ......    
     ..............        

     
Template Sequence  FLATSDLLLVTLKAW. . . . . . QVSDAVKSLA. . . . . . . . . . . . . . STLPVTTPILLIHNG
Template Known Secondary structure  T
S


......T..............TTS
TTS

SS
Template Predicted Secondary structure 




......
..............









Template SS confidence 



























































   60.........70.... .....80.... .....90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions