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Job Description | P41407 | Confidence | 34.89% | Date | Thu Jan 5 12:01:28 GMT 2012 |
Rank | 169 | Aligned Residues | 107 |
% Identity | 8% | Template | c2ia5C_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:polynucleotide kinase; |
PDBTitle: t4 polynucleotide kinase/phosphatase with bound sulfate and2 magnesium.
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Resolution | 2.90 Å |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | S | K | V | L | V | L | K | S | S | I | L | A | G | Y | S | Q | S | N | Q | L | S | D | Y | F | V | E | Q | W | R | E | K | H | S | A | D | E | I | T | V | R | D | L | A | A | N | P | I | P | V | L | D | G | E | L | V | G | A | L | R | P | S | D | A | P | L | T | P | R | Q | Q | E | A | L | A | L | S | D | E | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | K | K | I | I | L | T | I | G | C | P | . |
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W | A | R | E | F | I | A | K | N | P | G | . |
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F | Y | N | I | N | R | D | D | Y | R | Q | S | I | M | A | H | E | E | R | D | E | Y | K | Y | T | K | K | K | E | G | I | V | T | G | M | Q | F | D | T | A | K | S | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | |
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81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | A | E | L | K | A | H | D | V | I | V | I | A | A | P | M | Y | N | F | N | I | S | T | Q | L | K | N | Y | F | D | L | V | A | R | A | G | V | T | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | Y | G | G | D | S | V | K | G | V | I | I | S | D | T | N | L | N | . |
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P | E | R | R | L | A | W | E | T | F | A | K | E | Y | G | W | K | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
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90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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