Job Description P41407 Confidence 25.61% Date Thu Jan 5 12:01:28 GMT 2012 Rank 205 Aligned Residues 125 % Identity 17% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		M	S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	.	.	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D
Query Conservation																																																																.	.
Alig confidence					.											.													.	.	.																																	.	.
Template Conservation					.											.													.	.	.
Template Sequence		M	L	R	.	F	A	V	L	G	H	P	V	A	H	.	S	L	S	P	A	M	H	A	F	A	L	E	.	.	.	S	L	G	L	E	G	S	Y	E	A	W	D	T	P	L	E	A	L	P	G	R	L	K	E	V	R	R	A	F	R	G	V	N	L	T	L	P	L	K	E	A	A	L	A	H	L	D	W	V	S
Template Known Secondary structure					.						S	S		T	T	.		S											.	.	.		T	T												G	G	G													S						T	T	S	S	S	T	T	G	G	G	S	S
Template Predicted Secondary structure					.											.													.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G
Query Conservation
Alig confidence																	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	A	Q	R	I	G	A	V	N	T	V	L	Q	V	.	E	G	R	L	F	G	F	N	T	D	A	P	G	F	L	E	A	L	K	A	G	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	P	A	L	V	L	G	A	G	G	A
Template Known Secondary structure								T									.	T	T																			T	T			.	.	.	.	.	.	.	.	.	.	.	.			S								S
Template Predicted Secondary structure																	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.													.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions