Job Description P41407 Confidence 89.35% Date Thu Jan 5 12:01:28 GMT 2012 Rank 72 Aligned Residues 124 % Identity 17% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		M	S	K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	.	.	.	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S
Query Conservation																																																																.	.	.
Alig confidence																.													.	.	.																																	.	.	.
Template Conservation																.													.	.	.
Template Sequence		M	E	K	V	Y	G	L	I	G	F	P	V	E	H	.	S	L	S	P	L	M	H	N	D	A	F	A	.	.	.	R	L	G	I	P	A	R	Y	H	L	F	S	V	E	P	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A	V	I	P	F	L	D	E	V
Template Known Secondary structure											S	S		T	T	.		S											.	.	.		T	T												T	T													T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure																.													.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		D	E	L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	.	.	.	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G
Query Conservation																				.	.	.
Alig confidence																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	H	A	R	R	I	G	A	V	N	T	I	I	N	N	D	G	R	L	V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	N	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	G	K	R	I	L	V	I	G	A	G	G
Template Known Secondary structure									T									T	T																				T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.															.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions