Job Description P41407 Confidence 25.79% Date Thu Jan 5 12:01:28 GMT 2012 Rank 204 Aligned Residues 126 % Identity 10% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		K	V	L	V	L	K	S	S	I	L	A	G	Y	S	Q	S	N	Q	L	S	D	Y	F	V	E	Q	W	R	E	K	H	S	A	D	E	I	T	V	R	D	L	A	A	N	P	I	P	V	L	D	G	E	L	V	G	A	L	R	P	S	.	.	.	D	A	P	L	T	P	R	Q	Q	E	A	L	A	L	S	D	E
Query Conservation																																																														.	.	.
Alig confidence														.													.	.	.																																	.	.	.
Template Conservation														.													.	.	.
Template Sequence		D	L	Y	A	V	W	G	N	P	I	A	Q	.	S	K	S	P	L	I	Q	N	K	L	A	A	.	.	.	Q	T	H	Q	T	M	E	Y	I	A	K	L	G	D	L	D	A	F	E	Q	Q	L	L	A	F	F	E	E	G	A	K	G	C	N	I	T	S	P	F	K	E	R	A	Y	Q	L	A	D	E	Y	S	Q
Template Known Secondary structure									S	S		T	T	.													.	.	.		T	T												T	T	T											T	T								T	T							T	T		S
Template Predicted Secondary structure														.													.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	E	L	K	A	H	D	V	I	V	I	A	A	P	M	Y	N	F	N	I	S	T	Q	L	K	N	Y	F	D	L	V	A	R	A	G	V	T	F	R	Y	T	E	N	G	P	E	G	L	V	T	G	K	K	A	I	V	I	T	S	R	G	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	K	L	A	E	A	C	N	T	L	K	K	L	D	D	G	K	L	Y	A	D	N	T	D	G	I	G	L	V	T	D	L	Q	R	L	N	W	L	.	.	.	.	.	.	.	.	.	.	.	R	P	N	Q	H	V	L	I	L	G	A	G	G	A
Template Known Secondary structure							T			S						S	S	S																			T	T			.	.	.	.	.	.	.	.	.	.	.		T	T								S	S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions