Job Description P07018 Confidence 36.22% Date Thu Jan 5 11:00:03 GMT 2012 Rank 31 Aligned Residues 67 % Identity 12% Template c3b5nF_ PDB info PDB header:membrane protein Chain: F: PDB Molecule:protein sso1; PDBTitle: structure of the yeast plasma membrane snare complex Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	V	N	N	A	A	A	T	M	I	D	I	V	S	S	V	T	R	V	N	D	I	M	G	E	I	A	S	A	S	E	E	Q	Q	R	G	I	E	Q	V	A	Q	A	V	S	Q	M	D	Q	V	T	Q	Q	N	A	S	L	V	E	E	A	A	V	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	V	Q	A	R	H	Q	E	L	L	K	L	E	K	S	M	A	E	L	T	Q	L	F	N	D	M	E	E	L	V	I	E	Q	Q	E	N	V	D	V	I	D	K	N	V	E	D	A	Q	L	D	V	E	Q	G	V	G	H	T	D	K	A	V	K	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions