Job Description P07018 Confidence 55.01% Date Thu Jan 5 11:00:03 GMT 2012 Rank 23 Aligned Residues 85 % Identity 13% Template c2ieqC_ PDB info PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein Resolution 1.75 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	E	S	V	N	R	V	Q	Q	G	S	K	L	V	N	N	A	A	A	T	M	I	D	I	V	S	S	V	T	R	V	N	D	I	M	G	E	I	A	S	A	S	E	E	Q	Q	R	G	I	E	Q	V	A	Q	A	V	S	Q	M	D	Q	V	T	Q	Q	N	A	S	L	V	E	E	A	A	V	A	T	E	Q
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		I	N	N	I	V	A	S	F	S	S	V	N	D	A	I	T	Q	T	A	E	A	I	H	T	V	T	I	A	L	N	K	I	Q	D	V	V	N	Q	Q	G	S	A	L	N	H	L	T	S	Q	L	.	.	.	.	.	T	Y	L	N	L	S	S	E	L	K	Q	L	E	A	K	T	A	S	L	F	Q	T	T	V	E
Template Known Secondary structure																																																				.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	N	Q	A	D	H	L	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	G	L	I	D	Q	I	N	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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