Job Description P07018 Confidence 8.17% Date Thu Jan 5 11:00:03 GMT 2012 Rank 97 Aligned Residues 81 % Identity 16% Template c1wyyB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:e2 glycoprotein; PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	G	F	A	V	V	A	G	E	V	R	N	L	A	S	R	S	A	Q	A	A	K	E	I	K	G	L	I	E	E	S	V	N	R	V	Q	Q	G	S	K	L	V	N	N	A	A	A	T	M	I	D	I	V	S	S	V	T	R	V	N	D	I	M	G	E	I	A	S	A	S	E	E	Q	Q	R	G	I	E	Q
Query Conservation
Alig confidence																																																										.	.	.
Template Conservation																																																										.	.	.
Template Sequence		G	V	T	Q	N	V	L	Y	E	N	Q	K	Q	I	A	N	Q	F	N	K	A	I	S	Q	I	Q	E	S	L	T	T	T	S	T	A	L	G	K	L	Q	D	V	V	N	Q	N	A	Q	A	L	N	T	L	V	K	Q	.	.	.	L	S	S	N	F	G	A	I	S	S	V	L	N	D	I	L	S	R	L	D	K
Template Known Secondary structure																																																										.	.	.
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		892	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.				.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
		469	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		969	970	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions