Return to main results Retrieve Phyre Job Id

Job DescriptionP07018
Confidence39.56%DateThu Jan 5 11:00:03 GMT 2012
Rank29Aligned Residues69
% Identity16%Templatec1sfcJ_
PDB info PDB header:transport proteinChain: J: PDB Molecule:protein (syntaxin 1a); PDBTitle: neuronal synaptic fusion complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   424.....430.........440.........450.........460.........470.........480.........490..
Predicted Secondary structure 
Query SS confidence 




































































Query Sequence  VQQGSKLVNNAAATMIDIVSSVTRVNDIMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAV
Query Conservation                   
             
    

      

      
     
          
Alig confidence 




































































Template Conservation 
   
  
 

   
  

  
 

  

  
  

  


 

 

 

  
   
  
   
  
  
Template Sequence  SKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




































































   188.190.........200.........210.........220.........230.........240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions