 |
Job Description | P00894 | Confidence | 97.24% | Date | Thu Jan 5 10:57:05 GMT 2012 |
Rank | 21 | Aligned Residues | 104 |
% Identity | 7% | Template | c3n0vD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; |
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
|
Resolution | 2.25 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | I | L | S | V | L | L | E | N | E | S | G | A | L | S | R | V | I | G | L | F | S | Q | R | G | Y | N | I | E | S | L | T | V | A | P | T | D | D | P | T | L | S | R | M | T | I | Q | T | V | G | D | E | K | . |
V | L | E | Q | I | E | K | Q | L | H | K | L | V | D | V | L | R | V | S | E | L | G | Q | G | A |
Query Conservation |   |
|   |
|
|
|
|   |
|   |
|   |
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   | . |   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   | . |   |
|
|   |
|   |   |
Template Sequence |   |
T | W | I | L | T | A | D | C | P | S | X | L | G | T | V | D | V | V | T | R | Y | L | F | E | Q | R | C | Y | V | T | E | H | H | S | F | D | D | R | Q | S | G | R | F | F | I | R | V | E | F | R | Q | P | D | D | F | D | E | A | G | F | R | A | G | L | A | E | R | S | E | A | F | G | . |
X | A | F | E | L | T | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T | . |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | E | R | E | I | M | L | V | K | I | Q | A | S | G | Y | G | R | D | E | V | K | R | N | T | E |
Query Conservation |   |
  |
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |
Template Sequence |   |
P | N | H | R | P | K | V | V | I | X | V | S | K | A | D | H | C | L | N | D | L | L | Y | R | Q | R |
Template Known Secondary structure |   |
T | T |
|
|
|  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|