Job Description P00894 Confidence 23.18% Date Thu Jan 5 10:57:05 GMT 2012 Rank 88 Aligned Residues 27 % Identity 15% Template c2dnrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:synaptojanin-1; PDBTitle: solution structure of rna binding domain in synaptojanin 1 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		122	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		V	Q	L	A	G	T	S	G	K	.	.	.	.	.	.	L	D	A	F	L	A	S	I	R	D	V	A	K	I	V	E	V	A	R
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.															.
Template Conservation																															.
Template Sequence		I	K	S	S	L	P	E	N	N	F	F	D	D	A	L	I	D	E	L	L	Q	Q	F	A	S	F	G	E	V	.	I	L	I	R
Template Known Secondary structure					S	S	T	T	T		S															T	T				.
Template Predicted Secondary structure																															.
Template SS confidence
		899	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.		.	.	930	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions