Job Description P00894 Confidence 97.01% Date Thu Jan 5 10:57:05 GMT 2012 Rank 27 Aligned Residues 114 % Identity 11% Template c1u8sB_ PDB info PDB header:transcription Chain: B: PDB Molecule:glycine cleavage system transcriptional PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor Resolution 2.45 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.
Predicted Secondary structure				.	.																																																																		.	.	.	.	.
Query SS confidence				.	.																																																																		.	.	.	.	.
Query Sequence		M	R	.	.	R	I	L	S	V	L	L	E	N	E	S	G	A	L	S	R	V	I	G	L	F	S	Q	R	G	Y	N	I	E	S	L	T	V	A	P	T	D	D	P	T	L	S	R	M	T	I	Q	T	V	G	D	E	K	V	L	E	Q	I	E	K	Q	L	H	K	L	.	.	.	.	.	V	D	V	L	R	V
Query Conservation				.	.																																																																		.	.	.	.	.
Alig confidence				.	.																																					.	.																												.	.	.	.	.
Template Conservation																																										.	.
Template Sequence		L	T	Q	H	L	V	I	T	A	V	G	T	D	R	P	G	I	C	N	E	V	V	R	L	V	T	Q	A	G	C	N	I	I	D	S	R	I	A	M	F	.	.	G	K	E	F	T	L	L	M	L	I	S	G	S	P	S	N	I	T	R	V	E	T	T	L	P	L	L	G	Q	Q	H	D	L	I	T	M	M	K
Template Known Secondary structure																T	T											T	T	T												.	.	T	T																												T	T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		S	E	L	G	Q	G	A	H	V	E	R	E	I	M	L	V	K	I	Q	A	S	.	.	G	Y	G	R	D	E	V	K	R	N	T	E	I	F	R	G	Q	I	I	D	V	T
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		R	T	S	P	H	D	H	Q	T	H	A	Y	T	V	E	V	Y	V	E	S	D	D	K	L	G	L	T	E	K	F	T	Q	F	F	A	Q	R	Q	I	G	M	A	S	L	S
Template Known Secondary structure												S										S			T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions