Job Description P0AAC8 Confidence 9.91% Date Thu Jan 5 11:12:34 GMT 2012 Rank 14 Aligned Residues 40 % Identity 33% Template c2yujA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 Resolution UNK

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	V	K	V	V	V	D	G	K	S	L	Q	F	L	D	G	T	Q	L	D	F	V	K	E	G	L	N	E	G	F	K	F	T	N	P	N	V	K	D	E	C	G	C	G
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		K	G	G	K	I	I	M	P	P	S	A	L	D	Q	L	S	R	L	N	I	T	Y	P	M	L	.	.	.	.	.	F	K	L	T	N	K	N	S	D	R	M	T	H	C	G
Template Known Secondary structure		T	T	T															T	T			S	S			.	.	.	.	.						T	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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