Job Description P0AAC8 Confidence 8.69% Date Thu Jan 5 11:12:34 GMT 2012 Rank 19 Aligned Residues 39 % Identity 23% Template c1zc1A_ PDB info PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites Resolution UNK

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	V	V	V	D	G	K	S	L	Q	F	L	D	G	T	Q	L	D	F	V	K	E	G	L	N	E	G	F	K	F	T	N	P	N	V	K	D	E	C	G	C	G
Query Conservation
Alig confidence																										.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		G	G	K	I	F	L	P	P	S	A	L	S	K	L	S	M	L	N	I	R	Y	P	M	L	.	.	.	.	.	F	K	L	T	A	N	E	T	G	R	V	T	H	G	G
Template Known Secondary structure		S	S															T	T			S	S			.	.	.	.	.						T	T	T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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