|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
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|  | . | . |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |
Query SS confidence |   |
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| . |
. |
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Query Sequence |   |
M | K | L | M | F | A | S | D | I | H | G | S | L | . |
. |
P | A | T | E | R | V | L | E | L | F | A | Q | S | G | A | Q | W | L | V | I | L | G | D | V | L | N | H | G | P | R | N | A | L | P | E | G | Y | A | P | A | K | V | A | E | R | L | N | E | V | A | H | K | V | I | A | V | R | G | N | C | D | S | E | V | D |
Query Conservation |   |
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|   |
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|   |   | . | . |   |
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|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
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|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
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|   |   |   |   |
Alig confidence |   |
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| . | . |
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| . |
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| . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
  |
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|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |
|   |
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|   |
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|   |   |   |
|   |
| . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |
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|   | . |
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|   |
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|   |   |
Template Sequence |   |
M | R | V | L | F | I | G | D | V | M | A | E | P | G | L | R | A | V | G | L | H | L | P | D | I | R | D | R | . |
Y | D | L | V | I | A | N | G | E | N | A | A | R | G | K | G | . |
. |
. |
. |
. |
. |
. |
L | D | R | R | S | Y | R | L | L | R | E | A | G | V | D | L | V | S | L | . |
G | N | H | A | W | D | H | K |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | . |
| S |  |  |  |  |  |
| T | T | T | T | T | T | S | S | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| . |
| T | T | T | T | S |
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
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| . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
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. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | |
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. | 90 | . | . | . | . | . | . | . | . | . | 100 | |
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. | . | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
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| . | . | . |
Query SS confidence |   |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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| . |
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| . |
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. |
Query Sequence |   |
Q | M | L | L | H | F | P | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | W | Q | Q | V | L | L | E | K | Q | R | . |
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. |
L | F | L | T | H | G | H | L | . |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |   | . | . | . |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
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|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |
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|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
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|   |
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|
|   |   |
|   |   |   |
|   |
|
Template Sequence |   |
E | V | Y | A | L | L | E | S | E | P | V | V | R | P | L | N | Y | P | P | G | T | P | G | K | G | F | W | R | L | E | V | G | G | E | S | L | L | F | V | Q | V | M | G | R | I | F | M | D | P | L | D | D | P | F | R | A | L | D | R | L | L | E | E | E | K | A | D | Y | V | L | V | E | V | H | A | E | A | T | S | E |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  | S | S |  |  |
|
| T | T | S |
| S | S |
| S | S |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|
| T | T | S |
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  |  |  |  |
| S |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |
Template SS confidence |   |
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  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  | . | . | . | . |  |  |  |  |
|
|  |  |  |  |  |
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Query SS confidence |   |
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| . |
. |
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. |
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Query Sequence |   |
F | G | P | E | N | L | P | A | L | N | Q | N | D | V | L | V | Y | G | H | T | H | L | P | V | . |
. |
. |
. |
A | E | Q | R | G | E | I | F | H | F | N | P | G | S | V | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
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|   |
Alig confidence |   |
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| . | . | . | . |
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Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
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|   |
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|   |
|   |
|   |   |
|   |   |   |
|
|   |   |   |
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|   |
|
|   |
|
Template Sequence |   |
K | M | A | L | A | H | Y | L | D | G | R | A | S | A | V | L | G | T | H | T | H | V | P | T | L | D | A | T | R | L | P | K | G | T | L | Y | Q | T | D | V | G | M | T | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | B | T | T | B | S |  |  |  |  |  | S | S |
| S |
|
| S |
|
|  |  |
| T | T | S |
|  |  |  | S |
|
|
|
| B |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
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|  |  |  |  |  |
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Template SS confidence |   |
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  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |