Job Description P67095 Confidence 99.76% Date Wed Jan 25 15:21:00 GMT 2012 Rank 23 Aligned Residues 171 % Identity 23% Template c3t1iC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.													.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.
Query Sequence		M	K	L	M	F	A	S	D	I	H	G	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	A	T	E	R	V	L	E	L	F	A	Q	S	G	A	Q	W	L	V	I	L	G	D	V	L	N	H	G	P	R	N	A	L	P	E	G	Y	A	P	A	K	V	A	E	R	L	N	E	V	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.												.	.	.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		F	K	I	L	V	A	T	D	I	H	L	G	F	X	E	K	D	A	V	R	G	N	D	T	F	V	T	L	D	E	I	L	R	L	A	Q	E	N	E	V	D	F	I	L	L	G	G	D	L	F	H	E	N	K	P	S	R	K	T	.	.	.	.	L	H	T	C	L	E	L	L	R	K	Y	C	X	G	D	R	P
Template Known Secondary structure												B	T	T	T	S	S		T	T	T	T	T																T	T		S						S		S	B	S	S	S	S						.	.	.	.													B	S	S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
																64	.	.	.	.	.	70	.	.	.	.	.																					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	K	V	I	A	V	R	G	N	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	D	Q	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	L	E	K	Q	R	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	F	E	I	L	S	D	Q	S	N	L	N	I	S	I	P	V	F	S	I	H	G	N	H	D	D	P	T	G	A	D	A	L	C	A	L	D	I	L	S	C	A	G	F	V	N	H	F	G	R	S	X	S	V	E	K	I	D	I	S	P	V	L	L	Q	K	G	S	T	K	I	A	L	Y	G	L	G	S	I
Template Known Secondary structure								S	S						B		S								S	S	S			B	T	T	T	T	B										T	S										S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																														101	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	L	T	H	.	.	.	.	.	.	G	H	L	F	G	P	E	N	L	P	A	L	N	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	A	E	Q	R	.	.	.	.	G	E	I	F	H	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																																.	.	.	.
Template Conservation
Template Sequence		P	D	E	R	L	Y	R	X	F	V	N	K	K	V	T	X	L	R	P	K	E	D	E	N	S	W	F	N	L	F	V	I	H	Q	N	R	S	K	H	G	S	T	N	F	I	P	E	Q	F	L	D	D	F	I	D	L	V	I	W	G	H	E	H	E	C	K	I	A	P	T	K	N	E	Q	Q	L	F	Y	I	S
Template Known Secondary structure												T	T								S	S		G	G	G									S			S		S	S	S	S	S	S			G	G	G	S		T	T								S			S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		143	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.												.	.
Query SS confidence											.	.	.	.												.	.
Query Sequence		N	P	G	S	V	S	I	P	K	.	.	.	.	G	G	N	P	A	S	Y	G	M	L	D	.	.	N	D	V	L	S	V	I	A	L	N	D	Q	S	I
Query Conservation											.	.	.	.												.	.
Alig confidence											.	.	.	.												.	.
Template Conservation
Template Sequence		Q	P	G	S	S	V	V	T	S	L	S	P	G	E	A	V	K	K	H	V	G	L	L	R	I	K	G	R	K	X	N	X	H	K	I	P	L	H	T	V
Template Known Secondary structure						S	S			S							S											T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions