Job Description P67095 Confidence 99.76% Date Wed Jan 25 15:21:00 GMT 2012 Rank 22 Aligned Residues 162 % Identity 21% Template c3qg5D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.																	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	M	F	A	S	D	I	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	A	T	E	R	V	L	E	L	F	A	Q	S	G	A	Q	W	L	V	I	L	G	D	V	L	N	H	G	P	R	N	A	L	P	E	G	Y	A	P	A	K	V	A	E	R	L	N	E	V	A	H
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																																																																															.
Template Sequence		X	K	I	L	H	T	S	D	W	H	L	G	V	T	S	W	T	S	S	R	P	V	D	R	R	E	E	L	K	K	A	L	D	K	V	V	E	E	A	E	K	R	E	V	D	L	I	L	L	T	G	D	L	L	H	S	R	N	N	P	S	V	V	A	L	H	D	L	L	D	Y	L	K	R	X	X	R	.	T	A
Template Known Secondary structure												B	T					T	T	T	S				T																		T	T		S								S	B	S		S	S																			T	.	T	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.
		66	.	.	.	70	.	.	.	.	.												.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	I	A	V	R	G	N	C	D	.	.	.	.	.	.	.	.	.	.	.	S	E	V	D	Q	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	L	E	K	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	V	V	L	P	G	N	H	D	W	K	G	L	K	L	F	G	N	F	V	T	S	I	S	S	D	I	T	F	V	X	S	F	E	P	V	D	V	E	A	K	R	G	Q	K	V	R	I	L	P	F	P	Y	P	D	E	S	E	A	L	R	K	N	E	G	D	F	R	F	F	L	E	S	R	L	N	K	L	Y
Template Known Secondary structure									S			S	T	T													S	S						S	S	S							T	T														S									T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
												101	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																																													.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																																													.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	L	F	L	T	H	G	.	.	.	.	.	.	.	.	H	L	F	G	P	E	N	L	P	A	L	N	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	A	E	Q	R	G	E	I	F	H	F	N	P	G	S	V	S	I	P	.	.	.	K	G	G	N	P	A	S	Y	G
Query Conservation		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																														.															.	.	.
Template Conservation																																																							.
Template Sequence		E	E	A	L	K	K	E	D	F	A	I	F	X	G	H	F	T	V	E	G	L	A	G	Y	R	E	I	I	I	N	R	A	L	I	P	S	V	V	D	Y	A	A	L	G	H	I	H	S	F	R	E	I	Q	.	K	Q	P	L	T	I	Y	P	G	S	L	I	R	I	D	F	G	E	E	A	D	E	K	G	A	V
Template Known Secondary structure						T		S	S								S			T	T	S										G	G	G	S		S	S		S						S		S	S						.		T	T								S	S			S	G	G	G	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	D	N	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	E	L	K	R
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions