Job Description P67095 Confidence 98.61% Date Wed Jan 25 15:21:00 GMT 2012 Rank 63 Aligned Residues 146 % Identity 20% Template c3jyfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- PDBTitle: the crystal structure of a 2,3-cyclic nucleotide 2-2 phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor3 protein from klebsiella pneumoniae subsp. pneumoniae mgh 78578 Resolution 2.43 Å

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		3	.	.	.	.	.	.	10	.	.																	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.														.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.														.	.	.	.	.
Query Sequence		K	L	M	F	A	S	D	I	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	A	T	E	R	V	L	E	L	F	A	Q	S	G	A	Q	W	L	V	I	.	L	G	D	V	L	N	H	G	P	R	N	A	L	.	.	.	.	.	P	E	G	Y	A	P	A	K	V	A	E	R	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.														.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.														.	.	.	.	.
Template Conservation
Template Sequence		R	I	X	E	T	T	D	L	H	S	N	X	X	D	F	D	Y	Y	K	D	A	A	T	E	K	F	G	L	V	R	T	A	S	L	I	E	Q	A	R	A	E	V	K	N	S	V	L	V	D	N	G	D	V	I	Q	G	S	P	L	G	D	Y	X	A	A	K	G	L	K	E	G	D	V	H	P	V	Y	K	A	X
Template Known Secondary structure										T	T			S	S			T	T	T	T				S	S																T		S								S			S	S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	V	A	H	K	V	I	A	V	R	G	N	C	D	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	Q	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	.	.	.	.	.	.	.	.	.	L	E	K	Q	R	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Alig confidence									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		N	T	L	N	Y	A	V	.	G	N	L	G	N	H	E	F	N	Y	G	L	D	F	L	H	K	A	L	A	G	A	K	F	P	Y	V	N	A	N	I	I	D	A	K	T	G	K	P	X	F	T	P	Y	L	I	Q	D	T	R	V	V	D	S	D	G	Q	I	H	T	L	R	I	G	Y	I	G	F	V	P	P	Q
Template Known Secondary structure		T	T	S			S		.					G	G	G	G	T	T													S	S					S	S				T	T	T	T			S	S													T	T	S															T	T
Template Predicted Secondary structure									.
Template SS confidence
		90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																																							101	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	L	T	H	G	H	L	F	G	P	.	.	.	.	.	.	.	.	.	.	E	N	L	P	A	L	N	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	X	T	W	D	K	A	N	L	N	G	K	V	T	V	N	D	I	T	E	T	A	R	K	Y	I	P	E	X	R	A	K	G	A	D	V	V	V	V	V	A	H	S	G	L	S	A	D	P	Y	Q	A	X	A	E	N	S	V	Y	Y	L	S	Q	V	P	G	V	D	A	I	X	F	G	H	A	H	A	V	F	P
Template Known Secondary structure						T					T	T	T																				T	T		S													S				T	T		S							T	T	S	T	T								S	S					S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		134															.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	G	E	I	F	H	F	N	P	G	S	V	S	I
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	D	F	A	N	I	K	G	A	D	I	A	K	G	T	L	N	G	V	P	A	V	X	P	G	X	W	G	D
Template Known Secondary structure		S	G	G	G	T	T	S	T	T			T	T	T	T			T	T								S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions