Job Description P67095 Confidence 98.88% Date Wed Jan 25 15:21:00 GMT 2012 Rank 56 Aligned Residues 172 % Identity 14% Template c3e0jG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.												.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																													.												.
Query SS confidence											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																													.												.
Query Sequence		K	L	M	F	A	S	D	I	H	.	.	.	.	.	.	G	S	L	P	A	T	E	R	V	L	E	L	F	.	.	.	.	.	.	.	.	.	.	.	A	Q	S	G	A	Q	W	L	V	I	L	G	D	V	L	N	H	G	P	R	N	A	L	P	E	G	Y	A	.	P	A	K	V	A	E	R	L	N	E	V	.
Query Conservation											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																													.												.
Alig confidence											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																													.												.
Template Conservation
Template Sequence		F	V	L	L	V	S	G	L	G	L	G	G	G	G	G	E	S	L	L	G	T	Q	L	L	V	D	V	V	T	G	Q	L	G	D	E	G	E	Q	C	S	A	A	H	V	S	R	V	I	L	A	G	N	L	L	S	H	L	T	K	K	T	Q	A	A	S	V	E	A	V	K	M	L	D	E	I	L	L	Q	L	S
Template Known Secondary structure											B	T	S	S																	T	S	S	S									T	T								S		S	B
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
			64	.	.	.	.	.	70	.	.	.	.	.																.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	H	K	V	I	A	V	R	G	N	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	D	Q	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	L	E	K	Q	R	L	F	L	T	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	V	P	V	D	V	M	P	G	E	F	D	P	T	N	Y	T	L	P	Q	Q	P	L	H	P	C	M	F	P	L	A	T	A	Y	S	T	L	Q	L	V	T	N	P	Y	Q	A	T	I	D	G	V	R	F	L	G	T	S	G	Q	N	V	S	D	I	F	R	Y	S	S	M	E	D	H	L	E	I	L	E	W
Template Known Secondary structure				S								T	T	S	S	S		S	S	S	S						G	G	G						T	S	T	T						S	S						T	T							S	S										S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
													107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	H	L	F	G	P	E	N	L	P	A	L	N	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	A	E	Q	R	G	E	.	.	.	.	.	I	F	H	F	N	P	G	S	V	S	I	P	K	G	G	N	P	A	S	Y	G	M	L	D	N	D	V	L	S	V	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.											.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		T	L	R	V	R	H	I	S	P	T	A	P	D	T	K	T	D	P	F	I	F	P	E	C	P	H	V	Y	F	C	G	N	T	P	S	F	G	S	K	I	I	R	G	P	E	D	Q	T	V	L	L	V	T	V	P	D	F	S	.	.	.	.	.	A	T	Q	T	A	C	L	V	N	L	R	S	L	A	C	Q	P
Template Known Secondary structure					B	T		S		T	T	S							T	T	S		S	S			S								S	S									S	S														.	.	.	.	.										T	T	T	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		171	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	Q	S	I	I	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	F	S	G	F	G	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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