Job Description P67095 Confidence 99.87% Date Wed Jan 25 15:21:00 GMT 2012 Rank 14 Aligned Residues 163 % Identity 17% Template c3av0A_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s Resolution 3.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.														.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	M	F	A	S	D	I	H	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	T	E	R	V	L	E	L	F	A	Q	S	G	A	Q	W	L	V	I	L	G	D	V	L	N	H	G	P	R	N	A	L	P	E	G	Y	A	P	A	K	V	A	E	R	L	N	E	V	A	H	K	V	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation																																																																	.
Template Sequence		M	M	F	V	H	I	A	D	N	H	L	G	Y	R	Q	Y	N	L	D	D	R	E	K	D	I	Y	D	S	F	K	L	C	I	K	K	I	L	E	I	K	P	D	V	V	L	H	S	G	D	L	F	N	D	L	R	P	P	V	K	A	L	R	I	.	A	M	Q	A	F	K	K	L	H	E	N	N	I	K	V	Y
Template Known Secondary structure												B	T			G	G	G																					T	T			S						S		S	B	S	S	S	S									.											T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																																			.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	R	G	N	C	D	.	.	.	.	.	.	.	.	S	E	V	D	Q	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	L	E	K	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	L	T	H	G
Query Conservation									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	A	G	N	H	E	M	P	R	R	L	G	E	E	S	P	L	A	L	L	K	D	Y	V	K	I	L	D	G	K	D	V	I	N	V	N	G	E	E	I	F	I	C	G	T	Y	Y	H	K	K	S	K	R	E	E	M	L	D	K	L	K	N	F	E	S	E	A	K	N	Y	K	K	K	I	L	M	L	H	Q
Template Known Secondary structure						G	G	G	S		S	S	T	T	S			G	G	G	G	G	T	T	T					S								T	T													S	T	T																	T		S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		107	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																																												.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.																																												.	.	.	.	.	.	.
Query Sequence		H	L	F	G	P	.	.	.	.	.	.	E	N	L	P	A	L	N	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	A	E	Q	R	G	E	I	F	H	F	N	P	G	S	V	S	I	P	K	G	G	N	.	.	.	.	.	.	.	P	A	S	Y	G	M	L	D	N	D	V
Query Conservation							.	.	.	.	.	.																																												.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	N	P	Y	I	P	L	D	Y	E	L	E	H	F	D	L	P	K	F	S	Y	Y	A	L	G	H	I	H	K	R	I	L	E	R	F	N	D	G	I	L	A	Y	S	G	S	T	E	I	I	Y	R	N	E	Y	E	D	Y	K	K	E	G	K	G	F	Y	L	V	D	F	S	G
Template Known Secondary structure				T	T	T	S	S	S	S		S	S		G	G	G	S				S						S			S							S	S	S								S	S			S	G	G	G	T								S									S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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