|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
K | L | M | F | A | S | D | I | H | G | S | L | P | A | T | E | R | V | L | E | L | F | A | . |
Q | S | G | A | Q | W | L | V | I | L | G | D | V | L | N | H | G | P | R | N | A | L | P | E | G | Y | A | P | A | K | V | A | E | R | L | N | E | V | A | H | K | V | I | A | V | R | G | N | C | D | S | E | V | D | Q | M |
Query Conservation |   |
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|   |
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|   |   |   |
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|   |   |   |   | . |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
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|   |   |   |   |   |   |
Alig confidence |   |
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| . |
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| . | . | . | . | . | . | . | . |
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| . | . |
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Template Conservation |   |
|   |   |
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|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
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|   |
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|   |
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|   |   | . | . | . | . | . | . | . | . |
|   |   |
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|   |
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|   |   |   | . | . |   |
|   |   |
|   |
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|   |   |   |
|   |   |
Template Sequence |   |
R | V | I | I | V | G | D | I | H | G | C | R | A | Q | L | E | D | L | L | R | A | V | S | F | K | Q | G | S | D | T | L | V | A | V | G | D | L | V | N | K | G | P | D | . |
. |
. |
. |
. |
. |
. |
. |
S | F | G | V | V | R | L | L | K | R | L | . |
. |
G | A | Y | S | V | L | G | N | H | D | A | K | L | L | K | L |
Template Known Secondary structure |   |
|  |  |  |  |
|
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| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T | T | S |  |  |  |  |
| S |
|
| S | S | S | S | S |
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | T |
|  |  |
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|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
| . | . |
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|  |  |  |
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|  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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. | . | . | . | . | . | . | 70 | . | . | . | |
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. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | |
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. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
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. | . | . | 110 | . | . |
Predicted Secondary structure |   |
 |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|  |  |
Query SS confidence |   |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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Query Sequence |   |
L | L | H | F | P | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | W | Q | Q | V | L | L | E | K | Q | R | L | F | L | T | H | G | . |
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. |
H | L | F | G | P | E |
Query Conservation |   |
  |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
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|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | K | K | L | S | L | A | P | L | A | Q | S | I | P | T | D | V | E | T | Y | L | S | Q | L | P | H | I | I | R | I | P | A | H | N | V | X | V | A | H | A | G | L | H | P | Q | R | P | V | D | R | Q | Y | E | D | E | V | T | T | X | R | N | L | I | E | K | V | T | L | T | A | T | E | E | T | N | D | G | G | K | P |
Template Known Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  | G | G | G | T |  |  |  |  | S | S |
|
|
| T | T | S |
| G | G | G |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  | S |
| S | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
N | L | P | A | L | N | Q | N | D | V | L | V | Y | G | H | T | H | L | P | V | A | E | Q | R | . |
. |
G | E | I | F | H | F | N | P | G | S | V | S | I | P | K | G | G | N | P | A | S | Y | G | M | L | D | N | D | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
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|
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
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|   |   |
|   |   |   |   |   |   |   |
|   |
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|   |   |   |   |
Alig confidence |   |
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| . | . |
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| . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |
|   |   | . | . | . | . |   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|
Template Sequence |   |
W | A | S | X | W | R | G | P | E | T | V | V | F | G | H | D | A | R | R | G | L | Q | E | Q | Y | K | P | L | A | I | G | L | D | S | R | C | V | . |
. |
. |
. |
Y | G | G | R | L | S | A | A | V | F | P | G | G | C | I |
Template Known Secondary structure |   |
G | G | G | G |
|
|
| S | S |  |  |  |  |
|
|
| G | G | G |
|
| B |
| T | T | T | T | T |  |  |  |
|
|
| B | G | G | . | . | . | . | G | T | S |  |  |  |  |  |  |  | T | T | T |  |  |
Template Predicted Secondary structure |   |
|
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|  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
|
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| . | . | . | . |
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|  |  |  |  |  |  |  |
|
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|  |  |
Template SS confidence |   |
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  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
|
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. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |