|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
|
|
|  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
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|
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|
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|
|
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|
|
|
|
|
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|
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|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
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|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
L | M | F | A | S | D | I | H | G | S | L | P | A | T | E | R | V | L | E | L | F | A | Q | S | G | A | Q | W | L | V | I | L | G | D | V | L | N | H | G | P | R | N | A | L | P | E | G | Y | A | P | A | K | V | A | E | R | L | N | E | V | . |
. |
. |
. |
A | H | K | V | I | A | V | R | G | N | C | D | . |
. |
. |
. |
Query Conservation |   |
|   |
|
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|
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |
|   |   |
|   |
|
|
|
| . | . | . | . |
Alig confidence |   |
|
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| . | . | . | . | . | . | . | . |
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|
| . | . | . | . |
|
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|
| . | . | . | . |
Template Conservation |   |
|   |
|
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|
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |
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|   |   | . | . | . | . | . | . | . | . |
|   |
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|   |
|
|   |   |
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|   |   |
|   |   |
|   |
|
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|
|
|   |   |   |   |
Template Sequence |   |
V | T | V | C | G | D | I | H | G | Q | F | F | D | L | M | K | L | F | E | V | G | G | S | P | A | N | T | R | Y | L | F | L | G | D | Y | V | D | R | G | Y | F | . |
. |
. |
. |
. |
. |
. |
. |
S | I | E | C | V | L | Y | L | W | A | L | K | I | L | Y | P | K | T | L | F | L | L | R | G | N | H | E | C | R | H | L |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | T |
|
|  |  |  |
| S |
|
| S | S | S | S | S |
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |
|
|
| T | T | S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
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|
|  |  |  |  |
Template SS confidence |   |
|
|
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
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. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
  |   |
|
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76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
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|
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|
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
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| . |
. |
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. |
. |
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. |
. |
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. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | E | V | D | Q | M | L | L | H | F | P | I | T | A | P | W | Q | Q | V | L | L | E | K | Q | R | L | F | L | T | H | G | . |
. |
. |
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. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
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|
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|
|
| . | . | . |
|
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|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
| . | . | . |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
T | E | Y | F | T | F | K | Q | E | C | K | I | K | Y | S | E | R | V | Y | D | A | C | M | D | A | F | D | C | L | P | L | A | A | L | M | . |
. |
. |
N | Q | Q | F | L | C | V | H | G | G | L | S | P | E | I | N | T | L | D | D | I | R | K | L | D | R | F | K | E | P | P | A | Y | G | P | M | C | D | I | L | W | S |
Template Known Secondary structure |   |
 |  |  | S | S |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  | . | . | . | T | T | T |  |  |  |
| S | S |
|
|
| T | T |
|
| S |  |  |  |  |  |  | S |
|
| S | S | S |
|
| S | S | S |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
  |   |
|
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|
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|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 150 | |
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
| . | . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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. |
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. |
H | L | F | G | P | E | N | L | P | A | L | N | Q | N | D | V | L | V | Y | G | H | T | H | L | P | V | A | E | Q | R | G | E | I | F | . |
. |
. |
. |
. |
. |
. |
H | F | N | P | G | S | V | S | I | P | . |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|
|
|
|
|
|   |   |
| . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
D | P | L | E | D | F | G | N | E | K | T | Q | E | H | F | T | H | N | T | V | R | G | C | S | Y | F | Y | S | Y | P | A | V | C | E | F | L | Q | H | N | N | L | L | S | I | L | R | A | H | E | A | Q | D | A | G | Y | R | M | Y | R | K | S | Q | T | T | G | F | P | S | L | I | T | I | F | S | A | P | N | Y | L | D |
Template Known Secondary structure |   |
 |  |
| T | T | T | T | S |
|
|
|
|
| S |  |  |  |
| T | T | T | T | S | S |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | S |
|
| T | T | S |  |  |  |
|
| B |
| T | T | T | S | S | B | S |  |  |  |  |
|
|
| T | T | G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
  |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | G | N | P | A | S | Y | G | M | L | D | N | D | V | L | S | V | I | A | L | N |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
V | Y | N | N | K | A | A | V | L | K | Y | E | N | N | V | M | N | I | R | Q | F | N |
Template Known Secondary structure |   |
T | S |
|
|
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
  |