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Job DescriptionP67095
Confidence99.72%DateWed Jan 25 15:21:00 GMT 2012
Rank28Aligned Residues155
% Identity21%Templatec2dfjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:diadenosinetetraphosphatase; PDBTitle: crystal structure of the diadenosine tetraphosphate2 hydrolase from shigella flexneri 2a
Resolution2.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20..... ....30.........40.........50.........60.........70.........80..
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Query Sequence  LMFASDIHGSLPATERVLELFA. QSGAQWLVILGDVLNHGPRNALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQML
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Template Sequence  TYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGP. . . . . . . . GSLDVLRYVKSLGDSVRLVLGNHDLHLLAVF
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S
TT

TTT

S

SSSSS........
TGGG


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   3......10.........20.........30.........40... ......50.........60.........70....
 
   83.... ..90.........100......
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Query Sequence  LHFPI. . . . . . . . . . . . . . . . . . . . . . . TAPWQQVLLEKQRLFLTHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDA
Template Known Secondary structure  TTSS


GGG

TSTTTS
STTTTSS


TT

STT
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   75....80.........90.........100.........110.........120.........130.........140.........150....
 
   107..110.........120.........130 ...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HLFGPENLPALNQNDVLVYGHTHL. PVA
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Template Sequence  MYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGK
Template Known Secondary structure  TT
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S

TT

T

TTBSS

S
GGG

SS
GGGS

TTTTTS


GGGTT
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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   134.....140.........150.........160.........170
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Query Sequence  EQRGEIFHFNPGSVSIPKGGNPASYGMLDNDVLSVIA
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Template Sequence  GTPEGIYALDTGCCW. . . . GGSLTCLRWEDKQYFVQP
Template Known Secondary structure  S

TT



TTT....TSTTTT
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   235....240......... 250.........260.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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