Job Description P67095 Confidence 100.00% Date Wed Jan 25 15:21:00 GMT 2012 Rank 4 Aligned Residues 157 % Identity 27% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	K	L	M	F	A	S	D	I	H	G	S	L	P	A	T	E	R	V	L	E	L	F	A	Q	S	G	A	Q	W	L	V	I	L	G	D	V	L	N	H	G	P	R	N	A	L	P	E	G	Y	A	P	A	K	V	A	E	R	L	N	E	V	A	H	K	V	I	A	V	R	G	N	C	D	S	E	V	D	Q	.
Query Conservation																																																																																	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	G	I	M	S	D	T	H	D	H	L	P	N	I	R	K	A	I	E	I	F	N	D	E	N	V	E	T	V	I	H	C	G	D	F	V	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	I	K	E	F	E	N	L	N	A	N	I	I	A	T	Y	G	N	N	D	G	E	R	C	K	L
Template Known Secondary structure											T	T														T	S			S						S				S	T	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G			S								T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40														.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
							81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																		.
Query SS confidence		.	.	.	.	.																																		.
Query Sequence		.	.	.	.	.	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	L	E	K	Q	R	L	F	L	T	H	G	H	L	F	G	P	E	N	.	L	P	A	L	N	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	A	E	Q	R	G	E	I	F	H	F	N	P	G	S	V	S	I	P	K	G	G	N
Query Conservation		.	.	.	.	.																																		.
Alig confidence		.	.	.	.	.																																		.
Template Conservation
Template Sequence		K	E	W	L	K	D	I	N	E	E	N	I	I	D	D	F	I	S	V	E	I	D	D	L	K	F	F	I	T	H	G	H	H	Q	S	V	L	E	M	A	I	K	S	G	L	Y	D	V	V	I	Y	G	H	T	H	E	R	V	F	E	E	V	D	D	V	L	V	I	N	P	G	E	C	C	G	Y	L	T	G	I
Template Known Secondary structure										T	T					S							T	T								T	T															S						S	S									T	T									S	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	S	Y	G	M	L	D	N	D	V	L	S	V	I	A	L	N
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		P	.	T	I	G	I	L	D	T	E	K	K	E	Y	R	E	I	V
Template Known Secondary structure			.							T	T	T	T
Template Predicted Secondary structure			.
Template SS confidence
		148		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions