Job Description P67095 Confidence 99.29% Date Wed Jan 25 15:21:00 GMT 2012 Rank 46 Aligned Residues 144 % Identity 19% Template c1oidA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) Resolution 2.1 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.															.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		M	K	L	M	F	A	S	D	I	H	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	T	E	R	V	L	E	L	F	A	Q	S	G	A	Q	W	L	V	I	.	L	G	D	V	L	N	H	G	P	R	N	A	L	P	E	G	Y	A	P	A	K	V	A	E	R	L	N	E	V	A	H	K
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.							.	.	.
Template Conservation																																																								.	.	.
Template Sequence		I	T	V	L	H	T	N	D	H	H	G	H	F	W	R	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	.	.	.	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	V	G	Y	D
Template Known Secondary structure											T	T			S			T	T	S																					T	T									S			S	S	.	.	.	S						T	T	T	T											T
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		67	.	.	70	.	.	.	.	.	.	.																						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	A	V	R	G	N	C	D	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	Q	M	L	L	H	F	P	I	T	A	P	W	Q	Q	V	L	L	E	K	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		A	M	.	A	I	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I	E	F
Template Known Secondary structure				.				G	G	G	G	S	S													S	S					S	S				T	T	T			B	S	S									T	T											T	T					S		G	G	G	G	T	T
Template Predicted Secondary structure				.
Template SS confidence
		111	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
																									101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.														.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	L	T	H	G	H	L	F	G	P	E	N	L	P	A	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	D	V	L	V	Y	G	H	T	H	L	P	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	C	N	A	P	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H	S	Q	D	P	V	C	M	A	A	E	N	K	K	Q	V	D	Y
Template Known Secondary structure																		T	T			S								S				G	G	G			T	T	S											S		T	T	S	S	S						S	S			B						T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
									133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	E	Q	R	G	E	I	F	H	F	N	P	G	S	V	S	I
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G	K
Template Known Secondary structure			T	T	S								T	T						B		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions