 |
Job Description | P33668 | Confidence | 2.15% | Date | Thu Jan 5 11:52:35 GMT 2012 |
Rank | 67 | Aligned Residues | 34 |
% Identity | 29% | Template | c2eacB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:alpha-fucosidase; |
PDBTitle: crystal structure of 1,2-a-l-fucosidase from2 bifidobacterium bifidum in complex with3 deoxyfuconojirimycin
|
Resolution | 2.10 Å |
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | D | S | W | V | V | E | G | A | K | L | P | Y | E | V | A | G | G | V | F | I | I | E | I | N | K | K | N | G | C | V | L | N | F | L |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   | . |   |
|
|   |   |
|
|   |
|
|
|
| . |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
L | P | D | A | W | A | . |
G | G | S | V | S | G | L | V | A | R | G | N | . |
F | T | V | G | T | T | W | K | N | G | K | A | T | E | V | R |
Template Known Secondary structure |   |
|
| T | T |
|
| . | S |  |  |  |  |  |  |  |  | T | T | T | . |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |
|
| . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
804 | . | . | . | . | . | |
810 | . | . | . | . | . | . | . | . | . | 820 | . | |
. | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|