Return to main results Retrieve Phyre Job Id

Job DescriptionP56262
Confidence32.10%DateThu Jan 5 12:06:23 GMT 2012
Rank294Aligned Residues67
% Identity16%Templated2c71a1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210.........220.........230.... .....240.........250.........260...
Predicted Secondary structure 











....................












Query SS confidence 






























. . . . . . . . . . . . . . . . . . . .




























Query Sequence  DNSIPQESVETMRQALRAANAKAEIIVYPDA. . . . . . . . . . . . . . . . . . . . GHAFNADYRPSYHAASAEDGWQRMLEWFK
Query Conservation 
  

          
   
    
    
 .................... 
 
           
   
      

 
Alig confidence 






























....................




























Template Conservation 



    
  

  
    
 




 
                 
     

  
     
       

      
 
Template Sequence  DDGPDNVLTARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQ
Template Known Secondary structure  S


T



GGG
STT


SSSS

TT

Template Predicted Secondary structure 































Template SS confidence 















































































   487..490.........500.........510.........520.........530.........540.........550.........560......
 
   264.....270
Predicted Secondary structure 




Query SS confidence 






Query Sequence  QYGGKKS
Query Conservation   

    
Alig confidence 






Template Conservation     
   
Template Sequence  KYAGTTP
Template Known Secondary structure  S


Template Predicted Secondary structure 



Template SS confidence 






   567..570...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions