Return to main results Retrieve Phyre Job Id

Job DescriptionP56262
Confidence99.70%DateThu Jan 5 12:06:23 GMT 2012
Rank153Aligned Residues199
% Identity20%Templated1va4a_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Haloperoxidase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  SIPSQGDNMPAYHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVA
Query Conservation       
  
   
  
       
 

  

  
        
  

  
  
   
                       
Alig confidence 













......



















































........
Template Conservation 

  

  
 
   ......
 

 





              
   
  

  
  
 
 
        ........
Template Sequence  FVAKDGTQIYFKDW. . . . . . GSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGND. . . . . . . .
Template Known Secondary structure 
TTS
......SSSS

TT

GGGGTTT


TTSTTS


SS

S........
Template Predicted Secondary structure 

......




























........
Template SS confidence 















































































   3......10...... ...20.........30.........40.........50.........60........
 
   114.....120.........130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 
































......
Query SS confidence 









































































. . . . . .
Query Sequence  KVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVD. . . . . .
Query Conservation                         
   
 
 
 
 

  
   
                              ......
Alig confidence  .......


































































......
Template Conservation  .......                                                                         
Template Sequence  . . . . . . . YDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFA
Template Known Secondary structure  .......T

STT
STTS


S

B
BTTBTTSB
Template Predicted Secondary structure  .......









































Template SS confidence 















































































   6970.........80.........90.........100.........110.........120.........130.........140.
 
   188.190.........200...
Predicted Secondary structure  ................................................................







Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IATDLNAPILGLYGGQ
Query Conservation  ................................................................       
 
   
  
Alig confidence  ................................................................















Template Conservation                                                                         
 
 
 
  
Template Sequence  RFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDG
Template Known Secondary structure  TGGGT



S





S
TT
Template Predicted Secondary structure 


















Template SS confidence 















































































   142.......150.........160.........170.........180.........190.........200.........210.........220.
 
   204.....210.........220.........230.........240.........250.........260....
Predicted Secondary structure 
























Query SS confidence 




























































Query Sequence  DNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQ
Query Conservation 
  

          
   
    
    
  
 
           
   
      

  
Alig confidence 















...















........

















Template Conservation 
               ...        
   

  ........  
 
      
  

 
Template Sequence  DQIVPFETTGKVAAEL. . . IKGAELKVYKDAPHGF. . . . . . . . AVTHAQQLNEDLLAFLKR
Template Known Secondary structure 
SSS
GGGT...STT
TT

TT........TT
Template Predicted Secondary structure 




...









........


Template SS confidence 




























































   222.......230....... ..240.........250... ......260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions