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Job DescriptionP56262
Confidence99.46%DateThu Jan 5 12:06:23 GMT 2012
Rank204Aligned Residues177
% Identity17%Templated1r3da_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Hypothetical protein VC1974
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
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Query Sequence  KQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVAS
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Template Sequence  AKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPAEAVEXIEQTVQ. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

BTTB


TT

GGGGTTSS


TT
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   910.........20.........30.........40.........50.........60.........
 
   130.........140.........150.........160.........170.........180.......
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Query Sequence  WASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVD. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . AHVTSEVPVILVGYSLGGRLIXHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLS
Template Known Secondary structure  ...TT

TTSTTTTTTSS





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   77..80.........90.........100.........110.........120.........130.........140.........150...
 
   188.190.........200.........210.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IATDLNAPILGLYGGQDNSIPQESVETMRQAL
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Template Sequence  DWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHXLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQLAESS. . . . .
Template Known Secondary structure  TTSGGGTT

TTS
T
GGG



T
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TT
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   154.....160.........170.........180.........190.........200.........210.........220........
 
   220.........230.........240.........250.........260......
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Query Sequence  RAANAKAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQYG
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Template Sequence  . . . . . GLSYSQVAQAGHNV. . . . . . . . HHEQPQAFAKIVQAXIHSII
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STT

S
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   229230.........240.. .......250.........260..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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