Return to main results Retrieve Phyre Job Id

Job DescriptionP56262
Confidence99.91%DateThu Jan 5 12:06:23 GMT 2012
Rank76Aligned Residues231
% Identity17%Templated1hlga_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Gastric lipase
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AIVAGFTSIPS. QGDNMPA. YHARPKQSDGPLPVVIVVQEIFGVHEHI. . . . . . RDICRRLALEGYLAIAPELYFREGDP
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Template Sequence  GYPNEEYEVVTEDGYILEVNRIPYGKKNSGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWAR
Template Known Secondary structure  T



TTSB
S
SSTT





TT

GGGGGSS
TTS
TT



TTSTT

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   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   99100.........110.........120.........130.........140.........150.........160. ........170....
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Query Sequence  NDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNP. . . . QLKAAVAWYGKLT
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Template Sequence  RNLYYSPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQ. . KQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVAT
Template Known Secondary structure 
BSSS
TTSTGGG


T

..S
T
TTS

S
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   107..110.........120.........130.........140.... .....150.........160.........170.........180....
 
   175....180.......
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Query Sequence  GDKSLNSPKQPVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VKYTKSLINKLRFVPQSLFKFIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNP
Template Known Secondary structure 
SS

SGGGGGGG


SSB


TTTTTTSS
T




TTS
GGGTT

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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   188.190.........200.........210.........220....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IATDLNAPILGLYGGQDNSIPQESVETMRQALRAANA
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Template Sequence  AGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGLLLPKLPNL. .
Template Known Secondary structure  S

B
S
B



SSSSSS

B

GGG

S
TT
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   265....270.........280.........290.........300.........310.........320.........330.........340..
 
   225....230.........240.........250.........260.......
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Query Sequence  KAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQYGG
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Template Sequence  . IYHKEIPFYNHLDFIW. . . . . AMDAPQEVYNDIVSMISEDKK
Template Known Secondary structure  .TT

TT.....
TTTTTTT
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   343......350........ .360.........370.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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