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Job DescriptionP56262
Confidence99.65%DateThu Jan 5 12:06:23 GMT 2012
Rank176Aligned Residues207
% Identity9%Templatec3lp5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative cell surface hydrolase; PDBTitle: the crystal structure of the putative cell surface hydrolase from2 lactobacillus plantarum wcfs1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80..... ....90.........100........ .110.........
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Query Sequence  SDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYL. . . AIAPELYFREGDPNDFADIPTLL. . . . . . . . . SGLVAKVPDSQ
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Template Sequence  ATRMAP. VIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDK
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   120.........130.........140.........150.........160.. .......170.........180..
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Query Sequence  VLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQ. . . . . . LKAAVAWYGKLTGDKSLNSP. . . . . . . . . . .
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Template Sequence  QAVWLNTAFKALVKTY. HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTAKTSMFKELYRY
Template Known Secondary structure  TTS.

STTGGGSTT
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   7980.........90.... .....100.........110.........120.........130.........140.........150.......
 
   183......190.........200.........210.........220..... ....230.........240.........250.........260
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Query Sequence  KQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAK. . AEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLE
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Template Sequence  RTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQ. . . . . . . . . NKQIVSLIRQ
Template Known Secondary structure  GGGS
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   158.160.........170.........180.........190.........200.........210........ .220........
 
   261........
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Query Sequence  WFKQYGGKK
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Template Sequence  YLLAETMPD
Template Known Secondary structure  TS




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   229230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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