Job Description P56262 Confidence 99.71% Date Thu Jan 5 12:06:23 GMT 2012 Rank 151 Aligned Residues 202 % Identity 19% Template c3kdaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cftr inhibitory factor (cif); PDBTitle: crystal structure of the cftr inhibitory factor cif with the h269a2 mutation Resolution 1.50 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	T	S	I	P	S	Q	G	D	N	M	P	A	Y	H	A	R	P	K	Q	S	D	G	P	L	P	V	V	I	V	V	Q	E	I	F	G	V	H	E	H	I	R	D	I	C	R	R	L	A	L	E	G	Y	L	A	I	A	P	E	L	Y	F	R	E	G	D	P	N	D	F	A	D	I	P	T	L	L	S
Query Conservation
Alig confidence																				.	.	.	.	.	.																												.																									.	.	.	.
Template Conservation																				.	.	.	.	.	.																												.																									.	.	.	.
Template Sequence		F	E	S	A	Y	R	E	V	D	G	V	K	L	H	Y	V	K	G	.	.	.	.	.	.	G	Q	G	P	L	V	M	L	V	H	G	F	G	Q	T	W	Y	E	W	H	Q	L	M	P	E	L	A	.	K	R	F	T	V	I	A	P	D	L	P	G	L	G	Q	S	E	P	P	K	T	G	Y	S	.	.	.	.
Template Known Secondary structure										T	T									.	.	.	.	.	.			S	S								T	T			G	G	G	G	T	T						T	.	T	T	S								T	T	S	T	T					S	S		S	S	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.																												.																									.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	L	V	A	K	V	P	D	S	Q	V	L	A	D	L	D	H	V	A	S	W	A	S	R	N	G	G	D	V	H	R	L	M	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A	H	N	P	Q	L	K	A	A	V	A	W	Y	G	K	L	T	G	D	K	S	L	N	S	P	K	Q	P	V	D	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	E	Q	V	A	V	Y	L	H	K	L	A	R	Q	F	S	P	D	R	P	F	D	L	V	A	H	D	I	G	I	W	N	T	Y	P	M	V	V	K	N	Q	A	D	I	A	R	L	V	Y	M	E	A	P	I	P	D	A	R	I	Y	R	F	P	A	F	T	A	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																S	S	S	S								T					T	T							T	G	G	G								S	S			S	S	G	G	G	G	G	S		S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	L	V	W	H	F	S	F	F	A	A	D	D	R	L	A	E	T	L	I	A	G	K	E	R	F	F	L	E	H	F	I	K	S	H	A	S	N	T	E	V	F	S	E	R	L	L	D	L	Y	A	R	S	Y	A	K	P	H	S	L	N	A	S	F	E	Y	Y	R	A	L	N	E	S	V	R	Q	N	A	E
Template Known Secondary structure				S	S	T								S	T	T							T	T													T		S	S	G	G	G	S													T	S													T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
			188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	A	T	D	L	N	A	P	I	L	G	L	Y	G	G	Q	D	N	S	I	P	Q	E	S	V	E	T	M	R	Q	A	L	R	A	A	N	A	K	A	E	I	I	V	Y	P	D	A	G	H	A	F	N	A	D	Y	R	P	S	Y	H	A	A	S	A	E	D	G	W	Q	R	M	L	E	W	F	K	Q	Y
Query Conservation		.
Alig confidence		.																																	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		L	A	K	T	R	L	Q	M	P	T	M	T	L	A	G	G	G	A	G	G	M	G	T	F	Q	L	E	Q	M	K	A	Y	A	.	.	.	.	E	D	V	E	G	H	V	L	P	G	C	G	H	W	L	.	.	.	.	.	.	.	.	P	E	E	C	A	A	P	M	N	R	L	V	I	D	F	L	S	R	G
Template Known Secondary structure			T	T	S		B		S									S	T	T			T	T								T	T	B	.	.	.	.	S	S							T	T			S			.	.	.	.	.	.	.	.				S													T	T	S
Template Predicted Secondary structure																																			.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.									300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions