Job Description P56262 Confidence 100.00% Date Thu Jan 5 12:06:23 GMT 2012 Rank 10 Aligned Residues 217 % Identity 21% Template c3hlkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:acyl-coenzyme a thioesterase 2, mitochondrial; PDBTitle: crystal structure of human mitochondrial acyl-coa2 thioesterase (acot2) Resolution 2.10 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	S	I	P	S	Q	G	D	N	M	P	A	Y	H	A	R	P	K	Q	S	D	G	P	L	P	V	V	I	V	V	Q	E	I	F	G	V	H	E	H	I	R	D	I	C	R	R	L	A	L	E	G	Y	L	A	I	A	P	E	L	Y	F	R	E	G	D	P	N	D	F	A	D	I	P	T	L	L	S	G
Query Conservation
Alig confidence											.	.										.																					.	.																																	.	.	.	.	.
Template Conservation											.	.										.																					.	.																																	.	.	.	.	.
Template Sequence		R	R	E	P	V	R	V	G	R	.	.	V	R	G	T	L	F	L	P	P	.	E	P	G	P	F	P	G	I	V	D	X	F	G	T	G	G	G	L	L	E	.	.	Y	R	A	S	L	L	A	G	K	G	F	A	V	X	A	L	A	Y	Y	N	Y	E	D	L	P	K	T	X	E	T	L	H	.	.	.	.	.
Template Known Secondary structure									T	T	.	.									S	.	S	S			B									S	S		S				.	.								T	T	T									S	S	S	T	T	S		S			S				.	.	.	.	.
Template Predicted Secondary structure											.	.										.																					.	.																																	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	A	K	V	P	D	S	Q	V	L	A	D	L	D	H	V	A	S	W	A	S	R	N	G	G	D	V	H	R	L	M	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A	H	N	P	Q	L	K	A	A	V	A	W	Y	G	K	L	T	G	D	K	S	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	E	Y	F	E	E	A	X	N	Y	L	L	S	H	P	E	V	K	G	P	G	V	G	L	L	G	I	S	K	G	G	E	L	C	L	S	X	A	S	F	L	K	G	I	T	A	A	V	V	I	N	G	S	V	A	N	V	G	G	T	L	R	Y	K	G	E	T	L	P	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														S	T	T	B			S	S							T														S									S			S	B			S	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
																											179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	P	K	Q	P	V	D	I	A	T	D	L	N	A	P	I	L	G	L	Y	G	G	Q	D	N	S	I	P	Q	E	S	.	V	E	T	M	R	Q	A	L	R	A	A	N	A	K	.	A	E	I	I	V	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.															.
Template Conservation
Template Sequence		G	V	N	R	N	R	I	K	V	T	K	D	G	Y	A	D	I	V	D	V	L	N	S	P	L	E	G	P	D	Q	K	S	F	I	P	V	E	R	A	E	S	T	F	L	F	L	V	G	Q	D	D	H	N	W	K	S	E	F	Y	A	N	E	A	C	K	R	L	Q	A	H	G	R	R	K	P	Q	I	I	C	Y
Template Known Secondary structure			B		G	G	G					S	S	S					T	T		B			T	T	S	G	G	G	G	G	G	B			G	G	G			S								T	T			S	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.																.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	G	H	A	F	N	A	D	Y	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	H	A	A	S	A	E	D	G	W	Q	R	M	L	E	W	F	K	Q	Y	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	T	G	H	Y	I	E	P	P	Y	F	P	L	C	R	A	S	L	S	P	I	I	W	G	G	E	P	R	A	H	A	X	A	Q	V	D	A	W	K	Q	L	Q	T	F	F	H	K	H	L
Template Known Secondary structure		T	T			S				S	T	T
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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