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Job DescriptionP56262
Confidence99.68%DateThu Jan 5 12:06:23 GMT 2012
Rank162Aligned Residues183
% Identity15%Templatec3fsgC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:alpha/beta superfamily hydrolase; PDBTitle: crystal structure of alpha/beta superfamily hydrolase from oenococcus2 oeni psu-1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  GPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASR
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Template Sequence  GSGTPIIFLHGLSLDKQSTLFFEPLSNVGQYQRIYLDLPGXGNSDPISPST. . . . . . . . . . . SDNVLETLIEAIEEIIGA
Template Known Secondary structure  SSS

TT

TTT


TTTS
S
TT

TTSTTS


SS
S...........TT
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   16...20.........30.........40.........50.........60...... ...70.........80....
 
   134.....140.........150.........160.........170.........180.......
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Query Sequence  NGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVD. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . RRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSXNVII
Template Known Secondary structure  .....

TTTTTS

SS

GGG








S




TTGGG
S
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   86...90.........100.........110.........120.........130.........140.........150.........160
 
   188.190.........200.........210.........220........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEI
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Template Sequence  NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIXVGRNDQVVGYQEQLKLINHN. . . . ENGEI
Template Known Secondary structure  ST

TTS
S
TT


SS
TT
TTT
ST
....TT
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   161........170.........180.........190.........200.........210.........220.........230. .....
 
   229230.........240.........250.........260....
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Query Sequence  IVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQ
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Template Sequence  VLLNRTGHNL. . . . . . . . XIDQREAVGFHFDLFLDE
Template Known Secondary structure  SS

S
........T
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   237..240...... ...250.........260....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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