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Job DescriptionP56262
Confidence99.97%DateThu Jan 5 12:06:23 GMT 2012
Rank23Aligned Residues218
% Identity16%Templatec3bxpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative lipase/esterase; PDBTitle: crystal structure of a putative carboxylesterase (lp_2923) from2 lactobacillus plantarum wcfs1 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.. .......60...... ...70.........80.........90........
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Query Sequence  AIVAGFTSIPSQGDNMPAYHARPKQS. . . . . DGPLPVVIVVQEIF. . . GVHEHIRDICRRLALEGYLAIAPELYFREGDP
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Template Sequence  GXQVEQRTLNTAAHPFQITAYWLDQISDFETAVDYPIXIICPGGGFTYHSGREEAPIATRXXAAGXHTVVLNYQLIVGDQ
Template Known Secondary structure 

STT





SSS





STTTS


TTTT



STTT
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   0.........10.........20.........30.........40.........50.........60.........70.........
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  NDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKS
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Template Sequence  SVYPW. . . . . . . . . . . . ALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQH
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TT............TTTTSTT
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   80.... .....90.........100.........110.........120.........130.........140.......
 
   179180 .........190.........200.........210.........220.........230
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Query Sequence  LN. . . . . . . . . . . . . . . . . . . . . . . . . . . . SPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEIIV
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Template Sequence  AAIILGYPVIDLTAGFPTTSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAXLQHQVATAYHL
Template Known Secondary structure  SS


BTTSSSSSS
S
GGGSBGGGG

TTS


TT


S
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   231........240.........250.........260.....
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Query Sequence  YPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQY
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Template Sequence  FGSGDKYL. . . . . . . . . NDQAAIWPQLALRWLQEQ
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   228.230..... ....240.........250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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