Job Description P56262 Confidence 99.67% Date Thu Jan 5 12:06:23 GMT 2012 Rank 167 Aligned Residues 204 % Identity 16% Template c2vf2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate PDBTitle: x-ray crystal structure of hsad from mycobacterium2 tuberculosis Resolution 2.35 Å

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		29	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure														.																																									.	.
Query SS confidence														.																																									.	.
Query Sequence		V	A	G	F	T	S	I	P	S	Q	G	D	.	N	M	P	A	Y	H	A	R	P	K	Q	S	D	G	P	L	P	V	V	I	V	V	Q	E	I	F	G	V	H	E	H	I	R	D	I	C	R	R	L	A	.	.	L	E	G	Y	L	A	I	A	P	E	L	Y	F	R	E	G	D	P	N	D	F	A	D	I	P
Query Conservation														.																																									.	.
Alig confidence														.								.	.	.	.																														.	.
Template Conservation																						.	.	.	.
Template Sequence		T	S	R	F	A	E	V	D	V	D	G	P	L	K	L	H	Y	H	E	A	.	.	.	.	G	V	G	N	D	Q	T	V	V	L	L	H	G	G	G	P	G	A	A	S	W	T	N	F	S	R	N	I	A	V	L	A	R	H	F	H	V	L	A	V	D	Q	P	G	Y	G	H	S	D	K	R	A	E	H	G	Q
Template Known Secondary structure		T								S	S	S										.	.	.	.		T	T		S										S	T	T							S	T	T	T						T	T	S								T	T	S	T	T	S				S			S	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	S	G	L	V	A	K	V	P	D	S	Q	V	L	A	D	L	D	H	V	A	S	W	A	S	R	N	G	G	D	V	H	R	L	M	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A	H	N	P	Q	L	K	A	A	V	A	W	Y	G	K	L	T	G	D	K	S	L	N	S	P	K	Q	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	F	N	R	Y	A	A	M	A	L	K	G	L	F	D	Q	L	G	L	.	.	.	.	.	G	R	V	P	L	V	G	N	S	L	G	G	G	T	A	V	R	F	A	L	D	Y	P	A	R	A	G	R	L	V	L	M	G	P	G	G	L	S	I	N	L	F	A	P	D	P	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																	T		.	.	.	.	.		S							T													S	G	G	G								S		S	S	S				S	S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template SS confidence
												88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		186	.																																																																							.	.	190	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	T	D	L	N	A	P
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	V	K	R	L	S	K	F	S	V	A	P	T	R	E	N	L	E	A	F	L	R	V	M	V	Y	D	K	N	L	I	T	P	E	L	V	D	Q	R	F	A	L	A	S	T	P	E	S	L	T	A	T	R	A	M	G	K	S	F	A	G	A	D	F	E	A	G	M	M	W	R	E	V	Y	R	L	R	Q	P
Template Known Secondary structure													S												T	S		S	S	G	G	G														T	S														T	T	S	T	T	G	G	G	G		G	G	G	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	L	Y	G	G	Q	D	N	S	I	P	Q	E	S	V	E	T	M	R	Q	A	L	R	A	A	N	A	K	A	E	I	I	V	Y	P	D	A	G	H	A	F	N	A	D	Y	R	P	S	Y	H	A	A	S	A	E	D	G	W	Q	R	M	L	E	W	F	K
Query Conservation
Alig confidence																										.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		V	L	L	I	W	G	R	E	D	R	V	N	P	L	D	G	A	L	V	A	L	K	T	I	.	.	.	.	P	R	A	Q	L	H	V	F	G	Q	C	G	H	W	V	.	.	.	.	.	.	.	.	Q	V	E	K	F	D	E	F	N	K	L	T	I	E	F	L	G
Template Known Secondary structure								T	T		S	S	S		G	G	G	G								.	.	.	.	T	T							T	T			S			.	.	.	.	.	.	.	.				T												T	T
Template Predicted Secondary structure																										.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.									.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions