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Job DescriptionP56262
Confidence99.68%DateThu Jan 5 12:06:23 GMT 2012
Rank164Aligned Residues206
% Identity12%Templatec2ockA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  VAGFTSIPSQGDNMPAYHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLL
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Template Sequence  SVTSAKVAVNGVQLHYQQT. . . . GEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADF
Template Known Secondary structure 

TT....

S

TT


S
TTT

TTSTT

SS




TT
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   21........30......... 40.........50.........60.........70.........80.........90......
 
   109110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  SGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLN. . . . . . . .
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Template Sequence  FE. . . . . . . . . . . RDAKDAVDLMKALKFKK. . VSLLGWSNGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIR
Template Known Secondary structure  ...........TT
SS..T
TTTS

SB

S
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   97. .100.........110..... ....120.........130.........140.........150.........160...
 
   181........190.........200.........210.........220
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALR
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Template Sequence  DVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV.
Template Known Secondary structure 
GGGS

GGGGSGGGBSSTTTGGG

S
TT
SSS
S.
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   164.....170.........180.........190.........200.........210.........220.........230.........240..
 
   221........230.........240.........250.........260...
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Query Sequence  AANAKAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFK
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Template Sequence  . . . KGSRLHLMPEGKHNL. . . . . . . . HLRFADEFNKLAEDFLQ
Template Known Secondary structure  ...TT
TT

TT........T
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   243......250....... ..260.........270....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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