Job Description P56262 Confidence 100.00% Date Thu Jan 5 12:06:23 GMT 2012 Rank 3 Aligned Residues 229 % Identity 18% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure														.	.															.	.																			.	.	.	.	.	.	.	.
Query SS confidence														.	.															.	.																			.	.	.	.	.	.	.	.
Query Sequence		D	A	I	V	A	G	F	T	S	I	P	S	.	.	Q	G	D	N	M	P	A	Y	H	A	R	P	K	Q	.	.	S	D	G	P	L	P	V	V	I	V	V	Q	E	I	F	G	V	H	.	.	.	.	.	.	.	.	E	H	I	R	D	I	C	R	R	L	A	L	E	G	Y	L	A	I	A	P	E	L	Y	F
Query Conservation														.	.															.	.																			.	.	.	.	.	.	.	.
Alig confidence														.	.															.	.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	R	P	V	E	F	G	T	L	T	A	A	D	G	K	T	P	L	N	Y	S	V	I	K	P	A	G	F	D	P	A	K	R	Y	P	V	A	V	Y	V	Y	G	G	P	A	S	Q	T	V	T	D	S	W	P	G	R	G	D	H	L	F	N	Q	Y	L	A	Q	Q	G	Y	V	V	F	S	L	D	N	R	G
Template Known Secondary structure		T												T	T	S	S											S	S			T	T	S											S	T	T			S		S	S					S												T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	D	P	N	D	F	A	D	I	P	T	L	L	S	G	L	V	A	K	V	P	D	S	Q	V	L	A	D	L	D	H	V	A	S	W	A	S	R	N	G	G	D	V	H	R	L	M	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A	H	N	P	Q	L	K	A	A	V	A	W	Y	G	K	L
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		T	P	R	R	G	R	D	F	G	G	A	L	.	.	.	.	.	.	Y	G	K	Q	G	T	V	E	V	A	D	Q	L	R	G	V	A	W	L	K	Q	Q	P	W	V	D	P	A	R	I	G	V	Q	G	W	S	N	G	G	Y	M	T	L	M	L	L	A	K	A	S	D	S	Y	A	C	G	V	A	G	A	P	V
Template Known Secondary structure			S	S	S							T	T	.	.	.	.	.	.	T	T		T	T	T															T	S	T	T												T														T	T	T		S						S
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		563	.	.	.	.	.	.	570	.	.	.	.							.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		174	.	.	.																			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	N	S	P	K	Q	P	V	D	I	A	T	D	L	N	A	P	I	L	G	L	Y	G	G	Q	D	N	S	I	P	Q	E	S	V	E	T	M	R	Q	A	L	R	A	A	N	A	K	A	E	I	I	V	Y	P	D	A	G
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	W	G	L	Y	D	S	H	Y	T	E	R	Y	M	D	L	P	A	R	N	D	A	G	Y	R	E	A	R	V	L	T	H	I	E	G	L	R	S	P	L	L	L	I	H	G	M	A	D	D	N	V	L	F	T	N	S	T	S	L	M	S	A	L	Q	K	R	G	Q	P	F	E	L	M	T	Y	P	G	A	K
Template Known Secondary structure				G	G	G	S	B											T	G	G	G									S	G	G	G	G	G	G			S								T	T		S	S	S		T													T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	F	N	A	D	Y	R	P	S	Y	H	A	A	S	A	E	D	G	W	Q	R	M	L	E	W	F	K	Q	Y	G	G	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.
Template Sequence		H	G	L	.	.	.	.	.	.	.	.	S	G	A	D	A	L	H	R	Y	R	V	A	E	A	F	L	G	R	C	L	K	P
Template Known Secondary structure		S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.
Template SS confidence
		717	.	.									720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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