Job Description P56262 Confidence 99.97% Date Thu Jan 5 12:06:23 GMT 2012 Rank 24 Aligned Residues 236 % Identity 15% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																										.																																	.	.
Query SS confidence																										.																																	.	.
Query Sequence		S	P	L	A	S	T	I	V	Q	T	P	D	D	A	I	V	A	G	F	T	S	I	P	S	.	Q	G	D	N	M	P	A	Y	H	A	R	P	K	Q	S	D	G	P	L	P	V	V	I	V	V	Q	E	I	F	G	V	H	.	.	E	H	I	R	D	I	C	R	R	L	A	L	E	G	Y	L	A	I	A	P	E
Query Conservation																										.																																	.	.
Alig confidence																										.																																	.	.
Template Conservation
Template Sequence		T	P	W	E	P	V	H	L	T	F	D	P	A	D	F	R	V	E	Q	V	F	Y	P	S	K	D	G	T	K	V	P	M	F	I	V	R	R	K	D	A	K	G	P	L	P	T	L	L	Y	G	Y	G	G	F	N	V	A	L	T	P	W	F	S	A	G	F	M	T	W	I	D	S	G	G	A	F	A	L	A	N
Template Known Secondary structure					S					S	S		G	G	G											T	T	S											T	T			S												T	T																T	T	T
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	F	R	E	G	D	P	N	D	F	A	D	I	P	T	L	L	S	G	L	V	A	K	V	P	D	S	Q	V	L	A	D	L	D	H	V	A	S	W	A	S	R	N	G	G	D	V	H	R	L	M	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A	H	N	P	Q	L	K	A	A	V	A	W	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		L	R	G	G	G	E	Y	G	D	A	W	H	D	A	G	.	.	.	.	.	.	R	R	D	K	K	Q	N	V	F	D	D	F	I	A	A	G	E	W	L	I	A	N	G	V	T	P	R	H	G	L	A	I	E	G	G	S	N	G	G	L	L	I	G	A	V	T	N	Q	R	P	D	L	F	A	A	A	S	P	A
Template Known Secondary structure			T	T	S	S	T	T							T	T	.	.	.	.	.	.	S	G	G	G	T																	T	T	S	S		T	T								T														G	G	G		S
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.							540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180																									.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		G	K	L	T	G	D	K	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	K	Q	P	V	D	I	A	T	D	L	N	A	.	.	P	I	L	G	L	Y	G	G	Q	D	N	S	I	P	Q	E	S	V	E	T	M	R	Q	A	L	R	A	A	N	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		V	G	V	M	D	M	L	R	F	D	Q	F	T	A	G	R	Y	W	V	D	D	Y	G	Y	P	E	K	E	A	D	W	R	V	L	R	R	Y	S	P	Y	H	N	V	R	S	G	V	D	Y	P	A	I	L	V	T	T	A	D	T	D	D	R	V	V	P	G	H	S	F	K	Y	T	A	A	L	Q	T	A	A	I
Template Known Secondary structure		S					T	T	S	G	G	G	S	T	T	G	G	G	G							T	T	S									T	T		G	G	G				T	T	S											S			S	S	S		T													S
Template Predicted Secondary structure
Template SS confidence
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	E	I	I	V	Y	P	D	A	G	H	A	F	N	A	D	Y	R	P	S	Y	H	A	A	S	A	E	D	G	W	Q	R	M	L	E	W	F	K	Q	Y	G	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	K	P	H	L	I	R	I	E	P	I	D	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	E	E	T	A	D	V	Q	A	F	L	A	H	F	T	G
Template Known Secondary structure			S	S											.	.	.	.	.	.	.	.	.	.	.	.																		T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.													.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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