Job Description P56262 Confidence 100.00% Date Thu Jan 5 12:06:23 GMT 2012 Rank 13 Aligned Residues 253 % Identity 15% Template c1qfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (prolyl oligopeptidase); PDBTitle: prolyl oligopeptidase from porcine muscle Resolution 1.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.															.	.																			.	.	.
Query SS confidence																																			.															.	.																			.	.	.
Query Sequence		Q	Q	S	G	F	A	P	A	A	S	P	L	A	S	T	I	V	Q	T	P	D	D	A	I	V	A	G	F	T	S	I	P	S	.	Q	G	D	N	M	P	A	Y	H	A	R	P	K	Q	.	.	S	D	G	P	L	P	V	V	I	V	V	Q	E	I	F	G	V	H	.	.	.	E	H	I	R	D	I	C	R	R
Query Conservation																																			.															.	.																			.	.	.
Alig confidence																																			.															.	.																			.	.	.
Template Conservation
Template Sequence		L	T	K	E	E	L	E	P	R	V	F	R	E	V	T	V	K	G	I	D	A	S	D	Y	Q	T	V	Q	I	F	Y	P	S	K	D	G	T	K	I	P	M	F	I	V	H	K	K	G	I	K	L	D	G	S	H	P	A	F	L	Y	G	Y	G	G	F	N	I	S	I	T	P	N	Y	S	V	S	R	L	I	F
Template Known Secondary structure		T	T	S	S	S												T	T			G	G	G											T	T	S											T	T				S	S		S										T	T
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	E	G	Y	L	A	I	A	P	E	L	Y	F	R	E	G	D	P	N	D	F	A	D	I	P	T	L	L	S	G	L	V	A	K	V	P	D	S	Q	V	L	A	D	L	D	H	V	A	S	W	A	S	R	N	G	G	D	V	H	R	L	M	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A
Query Conservation
Alig confidence																													.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		V	R	H	M	G	G	V	L	A	V	A	N	I	R	G	G	G	E	Y	G	E	T	W	H	K	G	G	.	.	.	.	.	.	I	L	A	N	K	Q	N	C	F	D	D	F	Q	C	A	A	E	Y	L	I	K	E	G	Y	T	S	P	K	R	L	T	I	N	G	G	S	N	G	G	L	L	V	A	T	C	A	N
Template Known Secondary structure															T	T	S	S	T	T							T	T	.	.	.	.	.	.	S	G	G	G	T																	T	T	S			G	G	G							T
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.							.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																								.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		H	N	P	Q	L	K	A	A	V	A	W	Y	G	K	L	T	G	D	K	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	K	Q	P	V	D	I	A	T	D	L	N	A	.	.	.	.	.	.	P	I	L	G	L	Y	G	G	Q	D	N	S	I	P	Q
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	P	D	L	F	G	C	V	I	A	Q	V	G	V	M	D	M	L	K	F	H	K	Y	T	I	G	H	A	W	T	T	D	Y	G	S	D	S	K	Q	H	F	E	W	L	I	K	Y	S	P	L	H	N	V	K	L	P	E	A	D	D	I	Q	Y	P	S	M	L	L	L	T	A	D	H	D	D	R	V	V	P
Template Known Secondary structure				G	G	G		S						S					T	T	T	G	G	G	S	T	T	G	G	G	G								S												G	G	G						S	S	T	T												T	T			S	S		T
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		E	S	V	E	T	M	R	Q	A	L	R	A	A	.	.	.	.	.	.	.	N	A	K	A	E	I	I	V	Y	P	D	A	G	H	A	F	N	A	D	Y	R	P	S	Y	H	A	A	S	A	E	D	G	W	Q	R	M	L	E	W	F	K	Q	Y	G	G	K	K
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		L	H	S	L	K	F	I	A	T	L	Q	Y	I	V	G	R	S	R	K	Q	N	N	P	L	L	I	H	V	D	T	K	A	G	H	G	A	G	K	P	.	.	.	.	.	.	T	A	K	V	I	E	E	V	S	D	M	F	A	F	I	A	R	C	L	N	I	D
Template Known Secondary structure															T	T	T	S	T	T			S								S	S			S	S	T	T			.	.	.	.	.	.																				T
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.							.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions