Job Description P76403 Confidence 88.88% Date Thu Jan 5 12:22:42 GMT 2012 Rank 327 Aligned Residues 105 % Identity 17% Template d2bhua3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.1

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		11	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.									.	.	.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence														.	.	.	.									.	.	.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	G	A	D	A	V	Y	A	G	.	.	.	.	.	Q	P	R	Y	S	L	R	V	R	N	N	E	F	.	.	.	.	.	.	.	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	.	.	.	.	.	.	.
Query Conservation														.	.	.	.									.	.	.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence														.	.	.	.									.	.	.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	Y	R	A	A	A	E	K	L	P	Y	L	K	E	L	G	V	T	A	I	Q	V	M	P	L	A	A	F	D	G	Q	R	G	W	G	Y	D	G	A	A	F	Y	A	P	Y	A	P	Y	G	R	P	E	D	L	M	A	L	V	D	A	A	H	R	L	G	L	G	V	F	L	D	V	V	Y	N	H	F	G	P
Template Known Secondary structure			S							T								T													S	S	S				S	T	T									G	G	G																T	T										S				S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
																										67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.														100	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	A	P	H	N	A	K	L	K	T	F	I	R	D	L	K	P	V	V	.	E	M	G	P	D	A	L	I	M	S	D	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	M	L	V	R	E	H	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	N	Y	L	S	S	Y	A	P	S	Y	F	T	D	R	F	S	S	A	W	G	M	G	L	D	Y	A	E	P	H	M	R	R	Y	V	T	G	N	A	R	M	W	L	R	D	Y	H	F	D	G	L	R	L	D	A	T	P	Y	M	T	D	D	S	E	T	H	I	L	T	E	L	A	Q	E	I	H	E	L	G
Template Known Secondary structure		S	S								G	G	G								S	S	S					T	T	S																					S					T	T	G	G	G					S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		109	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	M	P	I	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	H	L	L	L	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions