 |
Job Description | P76403 | Confidence | 83.36% | Date | Thu Jan 5 12:22:42 GMT 2012 |
Rank | 385 | Aligned Residues | 77 |
% Identity | 10% | Template | d1yx1a1 |
SCOP info | TIM beta/alpha-barrel
| Xylose isomerase-like
| KguE-like
|
Resolution | 1.80 |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | L | K | N | M | R | Y | A | F | A | Y | G | A | D | A | V | Y | A | G | Q | P | R | Y | S | L | R | V | R | N | N | E | F | N | H | E | N | L | Q | L | G | I | N | E | A | H | A | L | G | K | K | F | Y | V | V | V | N | I | A | . |
. |
. |
P | H | N | A | K | L | K | T | F | I | R | D | L | K | P | V | V | E |
Query Conservation |   |
|   |
|
|   |
|   |
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |
|
|
|   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |
| . | . | . |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
G | Q | A | S | F | L | P | L | L | A | X | A | G | A | Q | R | V | E | L | R | E | E | L | F | . |
. |
. |
. |
. |
. |
. |
. |
A | G | P | P | D | T | E | A | L | T | A | A | I | Q | L | Q | G | L | E | C | V | F | S | S | P | L | E | L | W | R | E | D | G | Q | L | N | P | E | L | E | P | T | L | R | R | A | E | A |
Template Known Secondary structure |   |
| G | G | G | G |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | G | G | G |
| . | . | . | . | . | . | . | . | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S | B |
| T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | G | P | D | A | L | I | M |
Query Conservation |   |
  |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |
Template Sequence |   |
C | G | A | G | W | L | K | V |
Template Known Secondary structure |   |
T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|