Return to main results Retrieve Phyre Job Id

Job DescriptionP76403
Confidence92.06%DateThu Jan 5 12:22:42 GMT 2012
Rank249Aligned Residues126
% Identity15%Templated1uuma_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDA
Query Conservation 

 
 


  





 
   
  
  
 


 


 
 
  

  
 






 
    

      
  
   



Alig confidence 































.





































...





Template Conservation             

 
 

 
 
          .     
  

     

 


            
    ...  
  
Template Sequence  YAEGVRTLGPLADYLVVNVSSQGKTELRHLLS. KVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIASVAR. . . ELGIDG
Template Known Secondary structure  GGG
SS



.TSSSS



S


...T

Template Predicted Secondary structure 
















.








...



Template SS confidence 















































































   195....200.........210.........220...... ...230.........240.........250.........260.... .....270
 
   93.... ..100......... 110.........120.........130.........140..
Predicted Secondary structure 

.............................

.














Query SS confidence 




. . . . . . . . . . . . . . . . . . . . . . . . . . . . .











.
































Query Sequence  LIMSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . PGLIMLVREHFP. EMPIHLSVQANAVNWATVKFWQQMGLTRVILSR
Query Conservation 


 
............................. 
 
 
 

  
. 
 

 


 

 
  
  
    
  





Alig confidence 




.............................











.








..





















Template Conservation 
   
                 

 

    
 

  
  
       



  

..
  
 

   
  

  
 


Template Sequence  LIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRIPIIGVGG. . VSSGQDALEKIQAGASLVQLYT
Template Known Secondary structure 


BS


TT


GGGGS
SGGGTTT
S
SS..

STS
Template Predicted Secondary structure 






























..








Template SS confidence 















































































   280.........290.........300.........310.........320.........330..... ....340.........350.......
 
   143.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  EL
Query Conservation 

Alig confidence 

Template Conservation 
 
Template Sequence  AL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   358.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions