Job Description P76403 Confidence 93.79% Date Thu Jan 5 12:22:42 GMT 2012 Rank 193 Aligned Residues 87 % Identity 21% Template d1uoka2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.00

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																		.	.	.	.					.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																.	.	.	.																		.	.	.	.					.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		P	A	G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	.	.	.	.	N	N	E	F	.	.	.	.	.	.	.	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	N	I	.	.	.	.
Query Conservation																.	.	.	.																		.	.	.	.					.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence																.	.	.	.																		.	.	.	.					.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		G	I	G	D	L	R	G	I	I	S	K	L	D	Y	L	K	E	L	G	I	D	V	I	W	L	S	P	V	Y	E	S	P	N	D	D	N	G	Y	D	I	S	D	Y	C	K	I	M	N	E	F	G	T	M	E	D	W	D	E	L	L	H	E	M	H	E	R	N	M	K	L	M	M	D	L	V	V	N	H	T	S
Template Known Secondary structure		S	S								T	T								T															T	T	T	T	S	S		S							G	G	G																T	T										S	B
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
																																																																				69	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	H	N	A	K	L	K	T	F	I	R	D	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	H	N	W	F	I	E	S	R	K	S	K	D	N	K	Y	R	D	Y	Y	I	W	R	P	G	K	E	G	K	E	P	N	N	W	G	A	A	F	S	G	S	A	W	Q	Y	D	E	M	T	D	E	Y	Y	L	H	L	F	S	K	K	Q	P	D	L	N	W	D	N	E	K	V	R	Q	D	V	Y	E	M	M
Template Known Secondary structure		T	T	S							T	T		T	T		T	T	G	G	G	B						S	S	S	S		S	S		B	B		T	T	S	S	B	S					T	T	T	T						S	S		T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	V	V	E	M	G	P	D	A	L	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	W	L	E	K	G	I	D	G	F	R	M
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions