Return to main results Retrieve Phyre Job Id

Job DescriptionP76403
Confidence69.53%DateThu Jan 5 12:22:42 GMT 2012
Rank497Aligned Residues110
% Identity8%Templated1twia2
SCOP infoTIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50....... ..60.........70.........80.........90.........100....... ..110.........120
Predicted Secondary structure  ...














.







Query SS confidence 












. . .

















































.












Query Sequence  HENLQLGINEAHA. . . LGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREH. FPEMPIHLSVQAN
Query Conservation   


 
 
  

 ... 
 






 
    

      
  
   






 
 
 
 
 

 . 
 
 

 


 
Alig confidence 












...















.......









.















.










..
Template Conservation 
                   
 





    .......

      
 .
 
 

  

  
   
     
     ..
Template Sequence  YNRYIEAFKRWEEETGKEFIVAYAYKANANLA. . . . . . . ITRLLAKLGC. GADVVSGGELYIAKLSNVPSKKIVFNGN. .
Template Known Secondary structure  S

GGG


.......TT
.
STT

GGG

S..
Template Predicted Secondary structure 







.......


.







..
Template SS confidence 















































































   58.60.........70.........80......... 90......... 100.........110.........120.......
 
   121........130.........140.........150.........160.....
Predicted Secondary structure 
















Query SS confidence 












































Query Sequence  AVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFV
Query Conservation 
 
  
  
    
  









 

  
       





Alig confidence 



































.







Template Conservation   
    
  
   
   
 


  

  
   
   .     
 
Template Sequence  CKTKEEIIMGIEANIRAFNVDSISELILINETAKEL. GETANVAF
Template Known Secondary structure  S

TT
S
S.T

Template Predicted Secondary structure 








.



Template SS confidence 












































   128.130.........140.........150.........160... ......170.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions