Job Description P76403 Confidence 97.87% Date Thu Jan 5 12:22:42 GMT 2012 Rank 5 Aligned Residues 201 % Identity 18% Template d1twda_ SCOP info TIM beta/alpha-barrel CutC-like CutC-like Resolution 1.70

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		L	L	S	P	A	G	T	L	K	N	M	R	Y	A	F	A	Y	G	A	D	A	V	Y	A	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	V	V	.	.	.	.	.	N	I	A	P	H	N	A	K	L	K	T	F	I	R
Query Conservation																																																															.	.	.	.	.
Alig confidence																															.	.	.																	.	.	.											.	.	.	.	.
Template Conservation																															.	.	.																	.	.	.
Template Sequence		L	E	I	C	C	Y	S	X	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	.	.	.	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	.	.	.	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E
Template Known Secondary structure							S	S										T	T		S						B		G	G	.	.	.	G	T		B													.	.	.				S					B			S	S	S	S		S
Template Predicted Secondary structure																															.	.	.																	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																		.	.																											.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																		.	.																											.	.	.	.	.
Query Sequence		D	L	K	P	V	V	E	M	G	P	D	A	L	I	M	S	.	.	.	.	.	.	.	.	D	P	G	L	I	M	L	V	R	E	H	F	P	E	M	P	I	.	.	H	L	S	V	Q	A	N	A	V	N	W	A	T	V	K	F	W	Q	Q	M	G	L	T	R	V	I	.	.	.	.	.	L	S	R	E	L	S
Query Conservation																		.	.	.	.	.	.	.	.																		.	.																											.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																		.	.																											.	.	.	.	.
Template Conservation
Template Sequence		D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	X	P	R	X	E	K	I	X	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	X	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	G	Q	K	S	D	A	L	Q	G
Template Known Secondary structure									T	T		S							B		T	T	S	S	B													T	T	S						G	G	G	G	G		S													T								T	T	S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	I	E	E	I	R	N	Q	V	P	D	M	E	I	E	I	F	V	H	G	A	L	C	M	A	Y	S	G	R	C	L	L	S	G	Y	I	N	K	R	D	P	N	Q	G	T	C	T	N	A	C	R	W	E	Y	N	V	Q	E	G	K	E	D	D	V	G	N	I	V	H	K	Y	E	P	I	P	V	Q	N
Query Conservation
Alig confidence																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	K	I	X	E	L	I	A	H	R	D	A	P	I	.	.	I	X	A	G	A	G	V	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	S	S	S				.	.					S	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		V	E	P	T	L	G	I	G	A	P	T	D	K	V	F	M	I	E	E	A	Q	R	P	G	E	Y	M	T	A	F	E	D	E	H	G	T	Y	I	M	N	S	K	D	L	R	A	I	A	H	V	E	R	L	T	K	M	G	V	H	S	L	K	I	E	G	R	T	K	S	F	Y	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	X	R	Y	R	N	Y	S	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																	182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
				297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Y	C	A	R	T	A	Q	V	Y	R	K	A	I	D	D	A	A	A	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Y	I	V	D	G	A	A	V	A	E	X	K	G	I	I	E	R	H	Q	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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