Return to main results Retrieve Phyre Job Id

Job DescriptionP76403
Confidence92.62%DateThu Jan 5 12:22:42 GMT 2012
Rank234Aligned Residues87
% Identity15%Templated1m53a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.. .......30 .........40... ......50.........60........
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Query Sequence  PAGTLKNMRYAFAY. . . . GADAVYAG. . . . QPRYSLRVRNNEF. . . . . . . . NHENLQLGINEAHALGKKFYVVVNI. . . .
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Template Sequence  GIGDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVINHTS
Template Known Secondary structure  SS

TT







TTTTSS
S
GGG

TT


SB

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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   6970.........80..
Predicted Secondary structure  ..................................................................


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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APHNAKLKTFIRDL
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Template Sequence  DQHPWFIQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLHYFARQQPDLNWDNPKVREDLYAML
Template Known Secondary structure  TTS
TT
TTGGGB


SSSS
SS

B
TTSSBS
TTT


SS
TT

BB
TTS
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   83......90.....
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Query Sequence  KPVVEMGPDALIM
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Template Sequence  RFWLDKGVSGMRF
Template Known Secondary structure  TTT

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   228.230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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