|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
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|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
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|  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |
Query SS confidence |   |
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| . |
. |
. |
. |
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| . |
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| . |
. |
. |
. |
. |
Query Sequence |   |
P | A | G | T | L | K | N | M | R | Y | A | F | A | Y | . |
. |
. |
. |
G | A | D | A | V | Y | A | G | Q | P | R | Y | S | L | R | V | R | N | N | E | . |
. |
. |
. |
. |
. |
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. |
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. |
. |
F | N | H | E | N | L | Q | L | G | I | N | E | A | H | A | L | G | K | K | F | Y | V | V | V | N | I | . |
. |
. |
. |
. |
Query Conservation |   |
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|   |
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|   |
|   |
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|   |   | . | . | . | . |
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|   |
|   |   |   |
|   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . |
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|   |
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|   |
|   |
|   |   |
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|   |   |
|   |
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|   | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . |
Template Conservation |   |
  |   |
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|   |   |
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|   |   |
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|   |   |
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|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
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|   |   |   |
|   |   |   |
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|   |   |   |
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|   |   |
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|   |
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|   |   |   |
|   |   |
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|   |
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|   |
|   |
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|   |   |   |
Template Sequence |   |
G | V | G | D | F | R | G | L | K | N | A | V | S | Y | L | K | E | L | G | I | D | F | V | W | L | M | P | V | F | S | S | I | S | F | H | G | Y | D | V | V | D | F | Y | S | F | K | A | E | Y | G | S | E | R | E | F | K | E | M | I | E | A | F | H | D | S | G | I | K | V | V | L | D | L | P | I | H | H | T | G | F |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|  |  |
| S | S | S | S |
|
| S |
| S |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T | B |
|
| T |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
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69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
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A | P | H | N | A | K | L | K | T | F | I | R | D | L | K | P | V | V | E |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
Template Sequence |   |
L | H | T | W | F | Q | K | A | L | K | G | D | P | H | Y | R | D | Y | Y | V | W | A | N | K | E | T | D | L | D | E | R | R | E | W | D | G | E | K | I | W | H | P | L | E | D | G | R | F | Y | R | G | L | F | G | P | F | S | P | D | L | N | Y | D | N | P | Q | V | F | D | E | M | K | R | L | V | L | H | L | L | D |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  | T | T |
|  |  |  |  | T | T | B |
| B |
|
| T | T |
|
| T | T |
| B |
| S | S | S |
|
| B |
|  |  |  |
| T | T | S |
|  |  |  |
| T | T |
| T | T | S |
| B | B |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
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|
|  |  |  |  |  |
|
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|  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | G | P | D | A | L | I | M |
Query Conservation |   |
  |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |
Template Sequence |   |
M | G | V | D | G | F | R | F |
Template Known Secondary structure |   |
 | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . |
  |