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Job DescriptionP76403
Confidence71.22%DateThu Jan 5 12:22:42 GMT 2012
Rank489Aligned Residues74
% Identity18%Templated1kwga2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30. ........40.........50.........60........
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Query Sequence  KNMRYAFAYGADAVYAGQ. PRYSLRVRNNEFNHENLQLGINEAHALGKKFYVVVNI. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRYPEILPVDREGRRR
Template Known Secondary structure  T


TT

SBTTB


TTT

STTS


GGGS
B
TTS
B
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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   6970.........80.......
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Query Sequence  . . . . . . . . . APHNAKLKTFIRDLKPVVE
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Template Conservation                              
Template Sequence  RFGGRRHYCFSSPVYREEARRIVTLLAE
Template Known Secondary structure 
SSSS



TT
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   98.100.........110.........120.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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