Job Description P76403 Confidence 93.97% Date Thu Jan 5 12:22:42 GMT 2012 Rank 188 Aligned Residues 86 % Identity 24% Template d1h3ga3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.1

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		10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.															30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.
Predicted Secondary structure															.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																						.	.
Query SS confidence															.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																						.	.
Query Sequence		A	G	T	L	K	N	M	R	Y	A	F	A	Y	.	.	.	.	G	A	D	A	V	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	P	R	Y	S	L	R	V	R	N	N	E	F	.	N	H	E	N	L	Q	L	G	I	N	E	A	H	A	L	G	K	K	F	Y	V	.	.	V	V	N	I
Query Conservation															.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																						.	.
Alig confidence															.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																						.	.
Template Conservation
Template Sequence		G	G	D	I	R	G	T	I	D	H	L	D	Y	I	A	G	L	G	F	T	Q	L	W	P	T	P	L	V	E	N	D	A	A	A	Y	S	Y	H	G	Y	A	A	T	D	H	Y	R	I	D	P	R	Y	G	S	N	E	D	F	V	R	L	S	T	E	A	R	K	R	G	X	G	L	I	Q	D	V	V	L	S	H
Template Known Secondary structure											T								T															S	S		G	G	G			S		S							T	T	T																T	T										S	B
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		69	70	.	.																																																												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		A	P	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	L	K	T	F	I	R	D	L	K	P	V	V	E	.	M
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		I	G	K	H	H	W	W	X	K	D	L	P	T	P	D	W	I	N	Y	G	G	K	F	V	P	T	Q	H	H	R	V	A	V	Q	D	P	Y	A	A	Q	A	D	S	E	N	F	T	K	G	W	F	V	E	G	X	P	D	L	N	Q	T	N	P	L	V	A	N	Y	L	I	Q	N	N	I	W	W	I	E	Y	A
Template Known Secondary structure				T	T	S	G	G	G	G	S		S	S	T	T	S	B	S			S	S			B					G	G	G	G	S		T	T												S	B	S	S	T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		89	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	D	A	L	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	S	G	L	R	I
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions